Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01061 ATGGCACGTTCCTTAAAGAGTGTTTTTATTGCTCCTGAATTGAATGAGAGCATGCTTGGCTCCAAAACCAAAGGAGCTTTGGTGCCTTGTTCTTCGAACAAAGCAAAATCAAAGGGTTGTTCTGTTTTGAATAATGTCTTCATGGGAGAATCTGTTGCCCTAGATGAAAAAGGTTTAGGGTATTGCAGTTCAAAAGCCTCTAGCAGTGTTTCTGTTCATGCGCAAGCAACAATTAGTGTTAGCAAGAGTTTGAAGTGGTGGGAAAAGAACCTAAAGCCTAACATGACTGAGATCCATTCAGCACAAGAACTGGTTCATTCTTTGCTCAAAGCTGGTGATTCATTGGTTGTGGTTGACTTCTATTCACCTGGTTGTGGAGGTTGCAAAGCCCTTGATTCAAAGATCTGTCAAATAGCTGGATTGCACCCAAATGCAATATTTCTGAGAGTAAATTACGATGAACTGAAAAACATGTGTCACGGTTTGCGCATTCACGTGTTACCTTTCTTCAGATTCTATAGAGGTGCGGAGGGTCGAGTTTGTAGCTTTAGCTGTACCAATGCAACTATCAAAAAATTCAAGGATGCCATGGCAAAATATAGCAATGAAAGTTGTAGTTTTGGTCCAGCGAAAGGTTTAGAAGAATCTGAGCTGAAAATTTTGGCCTCAATGGGTGAAATATCAAATGATTATTCGCTGTTGCTATATCCCAAACAAGAGAAAATGAAGAATTTGGTTAAGGATTTTTCTGGAGTTTGGAACATGACTAGTAACAGCAGGGGAGTTATGAAGGACACTATATTCTGA 807 0.3978 MARSLKSVFIAPELNESMLGSKTKGALVPCSSNKAKSKGCSVLNNVFMGESVALDEKGLGYCSSKASSSVSVHAQATISVSKSLKWWEKNLKPNMTEIHSAQELVHSLLKAGDSLVVVDFYSPGCGGCKALDSKICQIAGLHPNAIFLRVNYDELKNMCHGLRIHVLPFFRFYRGAEGRVCSFSCTNATIKKFKDAMAKYSNESCSFGPAKGLEESELKILASMGEISNDYSLLLYPKQEKMKNLVKDFSGVWNMTSNSRGVMKDTIF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01061 268 Pfam Thioredoxin 107 179 IPR013766 -
Vimu10g01061 268 PANTHER THIOREDOXIN, MITOCHONDRIAL 63 224 - -
Vimu10g01061 268 SUPERFAMILY Thioredoxin-like 85 200 IPR036249 -
Vimu10g01061 268 CDD TRX_family 109 177 - -
Vimu10g01061 268 Gene3D Glutaredoxin 86 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01061 Vimu-Chr10 9940695 9941807 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01061 - - gmx:100801871 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01061 10 9940695 9941807 Vimu10g01061 10 9940695 9941807 ECH