Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01053 ATGAAGTTCCATCTCTCTCTATTTGTTATAATAGGTATTACTTTTGGAATAAAACTTGAAGGGTGCCAATGCAAGGTTGTGCAGTTCATTTTTGGAGACTCCCTCTCGGATGTTGGAAATAACAAGTACCTTTCTAAAAGCCTTGCTCAGGCAAGTTTACCATGGTATGGTATTGATTTCGGCAATGGACTACCTAATGGTAGGTTCTCCAATGGTCGCACGGTTGCAGATATAATAGGTGACAACATGGGACTTCCTAGGCCTCCGGCATTTCTTGATCCATCTTTAACTGAAGATGTTATATTGGAAAATGGGGTGAATTATGCTTCTGGGGGTGGCGGCATATTGAATGAAACTGGCAGTTATTTTATTCAAAGGTTCTCTCTGTACAAACAAATTGAGCTGTTTCAGGGGACACAGGAACTGATCAGAAGCAGAGTTGGAAAAGATGAGGCAGAAAAGTTTTTCCAGGGAGCTCGTTATGTTGTTGCTTTAGGCAGCAATGACTTCATCAACAACTATTTGATGCCTGTTTACAGTGATTCATGGACATACAATGACGAAACATTTGTGAACTACTTGATGGGAACTCTTAGAGAACAATTGAAGCTACTTCATGGGCTTGGAGCCAGGCAATTGATGGTGTTTGGGCTGGGCCCAATGGGCTGCATTCCCCTTCAAAGAGTGCTTAGTACATCTGGAGACTGTCAAGACAGAACAAACAAGTTGGCTATGAGGTTTAACCAAGCTGGAAGCAAGTTAATAGATGAGTTGCAAAAGCAACTTCCCAATTCAAGCTACAGATTTGGAGATGCATATGATGTTGTTAATGATGTTATTAGCAACCCAAACAAATATGGATTCCAAAACTCAGACTCACCCTGTTGCTCCTTCGGGAACATTCGACCAGCTCTTACGTGTATTCCTGCATCAAAACTGTGCAAAGACAGAAGCAAGTACGTTTTCTGGGATGAGTACCATCCCTCAGATAGAGCCAATGAGCTAGTTGCGAATGAGCTGATCAAGAAATTTGGGTTTATGCGTTCTGACCAAACAAATCCTCCTTCACCATCACCTGCTATTGCCCCGTCTTCAAACCATTAA 1104 0.4203 MKFHLSLFVIIGITFGIKLEGCQCKVVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDFGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLTEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRSRVGKDEAEKFFQGARYVVALGSNDFINNYLMPVYSDSWTYNDETFVNYLMGTLREQLKLLHGLGARQLMVFGLGPMGCIPLQRVLSTSGDCQDRTNKLAMRFNQAGSKLIDELQKQLPNSSYRFGDAYDVVNDVISNPNKYGFQNSDSPCCSFGNIRPALTCIPASKLCKDRSKYVFWDEYHPSDRANELVANELIKKFGFMRSDQTNPPSPSPAIAPSSNH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01053 367 MobiDBLite consensus disorder prediction 347 367 - -
Vimu10g01053 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Vimu10g01053 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Vimu10g01053 367 Gene3D SGNH hydrolase 27 344 IPR036514 -
Vimu10g01053 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Vimu10g01053 367 SUPERFAMILY SGNH hydrolase 29 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01053 Vimu-Chr10 9810698 9812559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01053 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 33.968 1.51e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01053 - - gmx:100803991 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01053 10 9810698 9812559 Vimu10g01053 10 9810698 9812559 ECH