Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01037 ATGTCAGAGAAGATCATGTTTCACTCAAGATTTATATTTTACGTGATGATCATTTCTATGTTCCTTTTGGTCCTGTCATCTCTTTTCCTACTCCAGTTTAGCAGTCATTCTTTGATACCTAGATCAGTGTTAGAACTTATTCTTGTCAATAATGCGTCACTTTACTTCATGCCTAAATTGAAGAGAGAGCAGAACGTACTCCCTTCTTACCCTTCTGGGGATTTAAATTTTCAATCACAAAAGTCCAGAGAATCCGACTGTCAAGCTTCTGATTCAAGCAAGAAAACAAGTTCTGCAGGACAGAAGATGAATGTGGCATCTCACCCAGTTCGCCCATTATTGAGAGTATTCATGTATGACTTACCCCCAGAATTTCACTTTGGGTTATTGGGTTGGAAGGGAAGTTTGAATCAAACATGGCCTGAGGTGGATAACCCTGAAGGTATCCCACGCTATCCAGGTGGTCTGAACTTGCAGCACAGCATGGAGTACTGGCTCACCCTTGATCTTCTGTCATCAAACACAGCTAGAGTTGGTCATTCTTGCTCTGCAATCAGAGTGCAGGATTCAAGTCAAGCAGATGTAATTTTTGTGCCATTTTTCTCATCTCTGAGTTACAACAGGCATTCCAAGCTTCATGGAGAGGAAAAAGTTAGTGTTAACAAAATGTTGCAACACAAATTGGTGCAGTTCTTGATGGACCAGAAAGAATGGAAACGTTCAGGAGGGAAGGATCATCTGATTATAGCCCACCATCCTAACAGCTTGTTGGATGCAAGAAGAAAATTGGGTTCTGCTATGCTTGTGCTTGCAGATTTCGGAAGGTATCCTCCTCAATTAGCAAATATCAAGAAAGATGTAATAGCTCCCTACAGGCACCTAGTAGGCACCATACCAAGAGCTAAATCAGCTTCATATGAAGAACGTACCACACTGGTGTATTTCCAGGGAGCAATATACAGAAAAGACGGAGGAGCCATTCGCCAGGAACTGTACTACCTCCTGAAAGATGAGAAAGATGTGCATTTCAGTTTTGGGAGCATAGGAGGAAATGGGATCAATCAGGCAAGCCAGGGCATGGCCTTATCAAAATTCTGCCTCAACATTGCTGGTGATACCCCATCCTCGAATAGACTCTTTGACGCAATAGTAAGCCACTGTGTGCCTGTGATCATCAGTGATGAAATTGAGCTACCCTTTGAAGATGTTTTGGACTACTCAGATTTTTCTGTATTTGTGCGTGCCTCTGATGCTGTGAAGAAAGGCTACCTGCTGAATCTCCTTCGTTCTATCAAACGGGAAGAATGGAACAAGATGTGGGAAAGATTGAAGGAAATTACACCCCACTTTGAGTATCAGTATCCATCACAACCTGGGGATGCAGTGAATATGATTTGGCAGCAAATTGCAACAAAGATATCTTCAATAAGGTTCAATTTGCACAGAAAGAACAGATACCAGAGATCTCAGCTTCGTGTTAAGACAAACTGA 1491 0.4212 MSEKIMFHSRFIFYVMIISMFLLVLSSLFLLQFSSHSLIPRSVLELILVNNASLYFMPKLKREQNVLPSYPSGDLNFQSQKSRESDCQASDSSKKTSSAGQKMNVASHPVRPLLRVFMYDLPPEFHFGLLGWKGSLNQTWPEVDNPEGIPRYPGGLNLQHSMEYWLTLDLLSSNTARVGHSCSAIRVQDSSQADVIFVPFFSSLSYNRHSKLHGEEKVSVNKMLQHKLVQFLMDQKEWKRSGGKDHLIIAHHPNSLLDARRKLGSAMLVLADFGRYPPQLANIKKDVIAPYRHLVGTIPRAKSASYEERTTLVYFQGAIYRKDGGAIRQELYYLLKDEKDVHFSFGSIGGNGINQASQGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSDFSVFVRASDAVKKGYLLNLLRSIKREEWNKMWERLKEITPHFEYQYPSQPGDAVNMIWQQIATKISSIRFNLHRKNRYQRSQLRVKTN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01037 496 Pfam Exostosin family 114 426 IPR040911 -
Vimu10g01037 496 MobiDBLite consensus disorder prediction 81 104 - -
Vimu10g01037 496 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 88 468 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01037 Vimu-Chr10 9685181 9689526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01037 - - gmx:100795371 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01037 10 9685181 9689526 Vimu10g01037 10 9685181 9689526 ECH