Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01030 ATGGCTACAAAAGGGAACCCTGGAGACAATAGAAATAATAGGAGTCCGATGTCTGTTTTCATCATAGTTGGTTTGTGTGGTTTCTTCTATATATTGGGTTTGTGGCAACGGAGTGGCTTTGGAAAGGGAGATAGCATAGCTGTTGAGATTACTAAACACACAGATTGCAGTGTTCTATCTGATCTAAACTACGAGACTCACCATGATGATGATTTTGGAACATCTGATGGTTCTGACATACAAGTCAAGGAGTTCAAGCCTTGTGATGATCGTTACATTGATTTCACGCCTTGTCACGATCAAATGCGAGCGATGAAATTTCCTCGAGAAAATATGGCTTACAGAGAAAGGCACTGTTTTCCTGATGAAGACAAATTGCGTTGTCTCATACCTGCCCCGAGAGGATATGCAACACCATTTCCATGGCCCATGAGTCGTGATTATGTACCATATGCAAATGCACCTTACAAGAGTTTGACAGTTGAGAAGGCTGTGCAGAATTGGATACAATATGAAGGAAATGTTTTCAGGTTCCCTGGTGGTGGAACGCAATTTCCCAACGGCGCTGATGCTTACATTGATGAACTTGCATCTGCTATTCCATTGGACAATGGGATGGTTAGAACTGTATTGGATACTGGTTGTGGGGTTGCTAGTTTCGGTGCATACCTATTTAAGAAAAATGTTATTGCTATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCAGCAATCATTGGTGTTCTTGGAACAATAATGCTTCCCTTCCCGTCCGGAGCTTTTGATATGGCGCATTGTTCTCGCTGCTTGATTCAATGGGGTTCAAATGATGGAATATACATGAAGGAAGTGGACCGGGTTCTTAGACCTGGTGGTTACTGGGTATTGTCTGGTCCTCCTATCAACTGGAAAATGCACTTTGCTGCGTGGCAGCGTCCTGAATATGAGCTTGAGGAGGAACAACGGAAGATTGAGGAAATTGCTAAACTTCTATGCTGGGAAAAGAAATATGAAAAAGGTGAAACTGCGATCTGGAGAAAACAATTGCAAAGTGGTGATTGCACTGAAAGAGAAACTCAATCAACAATGTGTGCAACCACATATTCTGATGATGTCTGGTAA 1152 0.4236 MATKGNPGDNRNNRSPMSVFIIVGLCGFFYILGLWQRSGFGKGDSIAVEITKHTDCSVLSDLNYETHHDDDFGTSDGSDIQVKEFKPCDDRYIDFTPCHDQMRAMKFPRENMAYRERHCFPDEDKLRCLIPAPRGYATPFPWPMSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPNGADAYIDELASAIPLDNGMVRTVLDTGCGVASFGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGAFDMAHCSRCLIQWGSNDGIYMKEVDRVLRPGGYWVLSGPPINWKMHFAAWQRPEYELEEEQRKIEEIAKLLCWEKKYEKGETAIWRKQLQSGDCTERETQSTMCATTYSDDVW 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01030 383 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 23 383 IPR004159 GO:0008168
Vimu10g01030 383 Gene3D Vaccinia Virus protein VP39 162 370 IPR029063 -
Vimu10g01030 383 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 383 IPR004159 GO:0008168
Vimu10g01030 383 CDD AdoMet_MTases 209 307 - -
Vimu10g01030 383 FunFam probable methyltransferase PMT2 162 360 - -
Vimu10g01030 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 328 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01030 Vimu-Chr10 9499019 9503038 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01030 - - gmx:100807547 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01030 10 9499019 9503038 Vimu10g01030 10 9499019 9503038 ECH