Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00993 ATGACTGTATTCAGTAAACTTCTATATGGATCTTTGCATGTGAAAGCTTATGACTGGGTTGAGCCTCCCTTTGTCCTAGAAAGTAAAGGACCTGGATATCCTCAAGTAGATCTTCTTCTGAAATTTGACACCGTGAAAATCATGTTAATGGCTTATGCATTCTGCTGTACTGCATCCGTATTTCGAAGCTACTTGTTAATTGAGTTTTTTCTTTCTGGGGCAGTTAGACTAGCAAAATTAGCAGTTGATAAGGTGTTGAATGCACCGTGTACATCAGTCTTATATCCCAAACACGGTGGAAATCTGCACTGTTTTACAGCGGTAACACCATGTGCGATGCTAGACATTCTCACTCCTCCTTATACTGGAGAAGAAAGGAAGTGTACTTACTATCATGACTATCCTTATTCAGCTTTCATCAAATATGAGATTTCTAGGAGTGATTTTCTTGATGCCTGTGGCTCTGCAGCAGCTGGAAATGCACCTGTATATGATGGGGAAGAGGAGGAATATGCTTGGCTTGCAGAGTTAGAATCACCTAGAGATCTTTATATGCGTCTGGGGGTATATGCTGGTCCAACTATTCAGGAATAG 594 0.4091 MTVFSKLLYGSLHVKAYDWVEPPFVLESKGPGYPQVDLLLKFDTVKIMLMAYAFCCTASVFRSYLLIEFFLSGAVRLAKLAVDKVLNAPCTSVLYPKHGGNLHCFTAVTPCAMLDILTPPYTGEERKCTYYHDYPYSAFIKYEISRSDFLDACGSAAAGNAPVYDGEEEEYAWLAELESPRDLYMRLGVYAGPTIQE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00993 197 Pfam PCO_ADO 1 195 IPR012864 GO:0016702
Vimu10g00993 197 PANTHER UNCHARACTERIZED 1 194 IPR012864 GO:0016702
Vimu10g00993 197 SUPERFAMILY RmlC-like cupins 1 135 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00993 Vimu-Chr10 9048631 9050314 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00993 K23953 - gmx:100807889 222.631