Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00990 ATGGCTCAAAGTTTCACATATCAGCCACTGACCAAATCACCTCCTTCTTTTTCTTCTTCTTCTTCCTCTTTCTGTACCCATCGGACACCTCAGAGTGTGACTTTACGCACCCGGCGCCGCTCTCTCACTGTGCGCGCGGCGTCGACGACGGTGGCGAGGGAGTCCAAGGTGAAGTCGGTGAAGGCGAGGCAGATCGTGGACAGTCGGGGGAACCCAACAGTGGAGGTGGATCTGGTGACGGACGAACTTTTCCGATCGGCGGTGCCGAGCGGCGCGTCGACGGGGATTTACGAGGCTTTGGAGCTGAGGGATGGGGACAAGAGTGTTTACGGAGGGAAGGGCGTTCTTAACGCCGTTAGGAACATAAACGAGGTCTTGGCTTCGAAACTTGTCGGCGTCGACGTTAGGAACCAAGCTGATGTTGATGCTATTATGCTGGAAATCGATGGAACTCCTAACAAATCGAAACTAGGGGCTAATGCAATATTGGGAGTTTCACTGAGTGTATGTAGAGCTGGTGCAGGAGCAAAAGGAGTGCCTTTGTTCAAGCACATCCAGGAGATTTCAGGAACAAAGGAACTTGTTATGCCAGTTCCAGCTTTTAATGTTATAAATGGGGGCAGTCATGCTGGGAACAATTTGGCTATGCAAGAATTTATGATACTACCAGTTGGAGCAACTTCATTTGCTGAGGCATTCCGCATGGGCAGTGAAGATATTAGTTTTCATTCTAATGTTAGTGCAACAGTTTATCATGTACTAAAGGGGATAATCAAGGCAAAATATGGGCAAGATGCATGTAATGTTGGAGATGAAGGAGGATTTGCACCGAACGTTCAGGATAACAGGGAGGGGTTGGTTTTACTCATGGATGCCATTGAGAAGGCTGGTTATACTGGAAAGATTAAAATAGGTATGGATGTTGCGGCTTCTGAGTTTTACACCAAGGATGGGAAGTATGATTTGAATTTCAAGAGGCAGCCAAATGATGGAACTCATGTTCACTCTGCTCAGAGTCTTGGTCAACTTTATAAAGACTTTGTAAAAGACTTTCCCATTGTGTCAATTGAGGATCCGTTTGATCAAGATGATTGGGGTTCATGGACTTCCCTGCTTTCTTCAGTTGACATTCAACTTGTAGGAGATGATTTGTTAGTTACAAATCCAGTCAGAATAGCTGAGGCCATCAAGAAGAAGGCTTGCAATGGTTTGCTTCTAAAGGTTAACCAGATTGGTACAGTAACTGAATCTATTCAGGCTGCACTTGACTCAAAGGCTGCAGGTTGGGGTGTCATGGTTAGTCACCGGAGTGGCGAGACCGAAGATAATTTCATTGCCGATCTCTCTGTTGGCTTGGCCAGTGGACAGATAAAAACTGGTGCTCCTTGCCGAAGTGAGCGATTGGCAAAGTATAATCAGCTTCTTCGAATTGAAGAACTTGGAGGTGTGCGATATGCGGGTGAGGCTTTCAGATCACCTTAG 1482 0.4663 MAQSFTYQPLTKSPPSFSSSSSSFCTHRTPQSVTLRTRRRSLTVRAASTTVARESKVKSVKARQIVDSRGNPTVEVDLVTDELFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVRNINEVLASKLVGVDVRNQADVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLFKHIQEISGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEAFRMGSEDISFHSNVSATVYHVLKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIEKAGYTGKIKIGMDVAASEFYTKDGKYDLNFKRQPNDGTHVHSAQSLGQLYKDFVKDFPIVSIEDPFDQDDWGSWTSLLSSVDIQLVGDDLLVTNPVRIAEAIKKKACNGLLLKVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEELGGVRYAGEAFRSP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00990 493 PRINTS Enolase signature 158 174 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 PRINTS Enolase signature 88 102 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 PRINTS Enolase signature 404 418 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 PRINTS Enolase signature 433 450 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 PRINTS Enolase signature 215 228 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 PRINTS Enolase signature 381 392 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 Gene3D - 179 493 IPR036849 -
Vimu10g00990 493 CDD enolase 59 479 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 MobiDBLite consensus disorder prediction 1 32 - -
Vimu10g00990 493 FunFam Enolase 54 178 - -
Vimu10g00990 493 Pfam Enolase, N-terminal domain 57 185 IPR020811 -
Vimu10g00990 493 PANTHER ENOLASE 56 491 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 SMART Enolase_N_3 57 185 IPR020811 -
Vimu10g00990 493 FunFam Enolase 1 179 493 - -
Vimu10g00990 493 NCBIfam phosphopyruvate hydratase 58 487 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 SFLD enolase 57 479 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 Pfam Enolase, C-terminal TIM barrel domain 194 491 IPR020810 -
Vimu10g00990 493 SUPERFAMILY Enolase N-terminal domain-like 56 188 IPR029017 -
Vimu10g00990 493 Hamap Enolase [eno]. 55 481 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu10g00990 493 SMART Enolase_C_3 193 493 IPR020810 -
Vimu10g00990 493 SFLD Enolase 57 479 - -
Vimu10g00990 493 SUPERFAMILY Enolase C-terminal domain-like 193 480 IPR036849 -
Vimu10g00990 493 ProSitePatterns Enolase signature. 404 417 IPR020809 -
Vimu10g00990 493 Gene3D - 51 178 IPR029017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00990 Vimu-Chr10 9029428 9033049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00990 K01689 - gmx:100787451 830.476