Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00989 ATGTCAACTCCCTCCCAAACCATAACACCGTTACCACCCTTAACTCCCTCTTCCTTTCTCCTAATAAAACAGTTACGCTTCTTTCTCTACTCACGTACTTTTCCACACACACATCGTCGGAAAATGTTCCGCATAAACAACACCTTCGTCGGAATCCTCCACACGCTCCCTCTGCTCCTCGGCCTTGCCGCCCTCGGTGTGTCCGCTTACATCCGCCTCCACGGCGACTGCCAGAAGGTGCTCCAATACCCGCTCTTATTCACCGGCCTCTTCGTTTCCGTCGTCTCCGCTCTCGGCCTCGTCGGCGCGTTGTGCCGCGTCAACGCCGCACTCTACCTCTACCTCATCGTCACCTTCTTCGTCATCCTCGCCTTCGCCTCCTTCACTCTCGTCGCGCTCATCGTCGTCACCAAAGGCAACGCGCCGCACCGCGCCTCGCGCGTGGGCTTCACCGTACGGGACTTCTCGCCCTGGCTGCGCCACTACGTCTCTGACGACCACATCTGGGAGGACACGAAGAGGTGCTTCTTGCAAGCGCGTATCTGTCACGGCCTCGCCGTGGGCGCTAACAATGTCTCCCTCGTCTTCAAACACTCAACTACCACGCAGTTTGGGTGCTGCAAACCGCCGGAGCAATGTGGATTGAAACTGAACGGAACGTTGTGGGAGGCGCCGAAAGCGGGTGCAGCGGTGGAGGATTCTGATTGTAGGGTTTGGAGCAACAGGGAAGAGAAAATGTGTTTTGATTGCGATTCATGCAAAGGAGGAGTGCTGGCCGGAGTAAGGAAGCAGTGGAGAGATGTAAGCATACTGAATGCCTGCGTTGTAGTGATTCTGACCATCATCTACGTCTTCGCCTGTTACGCCATCAGAAACAACCGATTGGAGTACTCCAAATACACCGCCCAGAGAAACATGAGAATGAGAAAACTCACCTCAATTCACGATTGA 951 0.5489 MSTPSQTITPLPPLTPSSFLLIKQLRFFLYSRTFPHTHRRKMFRINNTFVGILHTLPLLLGLAALGVSAYIRLHGDCQKVLQYPLLFTGLFVSVVSALGLVGALCRVNAALYLYLIVTFFVILAFASFTLVALIVVTKGNAPHRASRVGFTVRDFSPWLRHYVSDDHIWEDTKRCFLQARICHGLAVGANNVSLVFKHSTTTQFGCCKPPEQCGLKLNGTLWEAPKAGAAVEDSDCRVWSNREEKMCFDCDSCKGGVLAGVRKQWRDVSILNACVVVILTIIYVFACYAIRNNRLEYSKYTAQRNMRMRKLTSIHD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00989 316 Pfam Tetraspanin family 49 289 IPR018499 GO:0016020
Vimu10g00989 316 PANTHER TETRASPANIN-8-RELATED 44 294 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00989 Vimu-Chr10 9021539 9022725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00989 42 294 Miscellaneous Gene Families AT1G18520 36.364 1.16e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00989 - - vun:114164519 545.428