Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00988 ATGGCTTATAAATCGTTAAGTTCTATCACTGTGTTGGATATTGAATCCCTCGGAATTGCGAAAGAAGATGCTACCACTCTTCACCAAAGTCTCACAGAAATCATCAAAAGTCATGGAGATGGCACCCCTGCCACGTGGCAACACATCAGCAGCAGCCTCCTCAACCCTGAACTTCCCTTCTCCTTCCATCAGATGCTGTACTATGGTTGCTACAAGGATTTCGGTCCCGACCCACCCGCTTGGATACCCGACCCGAAAAGTGCTGCTTTGACAAATGTTTGGCAGTTGCTAGAGAGGAGAGGGGAAGAGTTTCTGGGTTCTGCTTATAAGGACCCAATTACAAGCTTTGATGATTTCCTGAAGTTCTCAGTCTCAAACCCTGAGATATGTTGGAAATCTGTGTTTGATGAAATGAACATATCATTTTCCAAACCACCTGAATGCATCTTACGTGATAGCCCCACAGGGGAAGGCCCATTATCACACCCAGGTGGTCAATGGCTTCCTGGAGCATCTATTAATCCAGCACAGAATTGCATAAATATAAATGGCAAAAGAGGTTTGAATGATACAGTAATAATATGGCGCGAAGAACAACATGATGATCTCCCTCTAGAAAGGATGACACTCAAGGAACTGCGTGAAGAAGTATGGTTAGTTGCATATGCTCTCAATTCTCTGGATCTGGAGAAAGGATCTGCAATTGCAATTGATATGCCAATGAATGTGAAGTCTGTGGTTATCTACCTAGCTATTGTTCTTGCAGGTTATGTTGTTGTATCAATTGCTGATAGTTTTGCTGCTAGTGAAATATCAAACAGGCTTAGAATATCAAAAGCAAAAGTCGTATTTACCCAGGATCTCATTATTCGTGGAGACAAAAGTATCCCCCTTTACAGGAGAGTTGTAGATGCAGAGTCACCTATGGCAATAGTTATCCCTACCAAAGGATCTGAATTTAGCATGAAACTGCGCAACAGTGATCTTTCTTGGCATGATTTTTTGGAGAAAGTCTATAGTCTCAAAGGCAAGGAATTCATAGCAACAGAACAACCTGTAGAAACATTTACAAACATTCTCTTTTCATCTGGAACAACTGGTGATCCAAAGGCAATTCCATGGACCAATATTACTCCTCTAAAAGCTGCTGCAGATGCATGGTTCAACATGGACATTCGTAAAGGTGATGTGGTTTGCTGGCCCACTAATCTCGGATGGATGATGGGGCCATGGCTAGTATATGCATCCTTGCTAAATGGAGCTTCGATGGCTTTATATGTTGGATCTCCTCTTGGGTCTGGCTTTGCCAAGTTCGTACAGGATGCTAAAGTAACAATGCTTGGTGTTATTCCAAGTATTGTCCGGAGTTGGAAAAGTGCAAATTCCACATCTGGATATGATTGGTCTTCCATCCGTTGCTTTGGCTCCTCTGGTGAAGCATCTAATGTAGATGAATACCTTTGGCTGATGGGGAGAGCTCTCTACAAGCCGGTCATTGAATATTGTGGTGGTACAGAAATTGGGGGTGGCTTTGTGTGTGGATCACTACTACAGTCTCAGGCATTAGCTGCTTTTAGTACGCCCGCAATTTGCTGCAGTTTGTATATTCTTGGTGATAATGGCCATCCTATTCCACAAAATGTTCCAGGAATAGGCGAGCTGGCTCTTGGTTCCCTCATGCTTGGGGCATCAAATACACTGCTGAATGCTGACCATTATGATGTCTACTTCAAAGGAATGCCTCTATTGAATGGAAAGGTTTTACGGAGGCATGGGGATGTATTTGAGCGTACAGCTAGAGGATACTATCATGCACATGGTCGTGCGGACGACACAATGAACCTTGGGGGAATCAAGGTGAGTTCGGTTGAGATTGAACGCATATGCAATGAAGTAGATAACAGTGTTCTGGAAACAGCTGCGATAGGAGTTCCACCTTCTGGTGGTGGACCTGAGTTGTTGACGATAGTTGTTGTATTCAAGGATGCAAATTTTGCAAAGCAAGATTTACACCAATTGAGGATATCTTTTAATTCAGCTCTCCAAAAGAAACTAAATCCCCTGTTTCGGGTTTCTCAAGTTGTACCACTGCCATCTCTTCCAAGGACGGCATCCAACAAGGTCATGAGAAGGGTTTTAAGACAGCAGCTGACAGAAACTAACCAAAGTTCTAAAATATAA 2181 0.431 MAYKSLSSITVLDIESLGIAKEDATTLHQSLTEIIKSHGDGTPATWQHISSSLLNPELPFSFHQMLYYGCYKDFGPDPPAWIPDPKSAALTNVWQLLERRGEEFLGSAYKDPITSFDDFLKFSVSNPEICWKSVFDEMNISFSKPPECILRDSPTGEGPLSHPGGQWLPGASINPAQNCININGKRGLNDTVIIWREEQHDDLPLERMTLKELREEVWLVAYALNSLDLEKGSAIAIDMPMNVKSVVIYLAIVLAGYVVVSIADSFAASEISNRLRISKAKVVFTQDLIIRGDKSIPLYRRVVDAESPMAIVIPTKGSEFSMKLRNSDLSWHDFLEKVYSLKGKEFIATEQPVETFTNILFSSGTTGDPKAIPWTNITPLKAAADAWFNMDIRKGDVVCWPTNLGWMMGPWLVYASLLNGASMALYVGSPLGSGFAKFVQDAKVTMLGVIPSIVRSWKSANSTSGYDWSSIRCFGSSGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFVCGSLLQSQALAAFSTPAICCSLYILGDNGHPIPQNVPGIGELALGSLMLGASNTLLNADHYDVYFKGMPLLNGKVLRRHGDVFERTARGYYHAHGRADDTMNLGGIKVSSVEIERICNEVDNSVLETAAIGVPPSGGGPELLTIVVVFKDANFAKQDLHQLRISFNSALQKKLNPLFRVSQVVPLPSLPRTASNKVMRRVLRQQLTETNQSSKI 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00988 726 Gene3D - 103 610 IPR042099 -
Vimu10g00988 726 Pfam AMP-binding enzyme 205 615 IPR000873 -
Vimu10g00988 726 ProSitePatterns Putative AMP-binding domain signature. 359 370 IPR020845 -
Vimu10g00988 726 Gene3D - 611 726 IPR045851 -
Vimu10g00988 726 SUPERFAMILY Acetyl-CoA synthetase-like 118 719 - -
Vimu10g00988 726 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 2 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00988 Vimu-Chr10 8999257 9016395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00988 1 589 Acyl Lipid Metabolism Gene Families AT5G23050 66.780 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00988 - - gmx:100779628 1329.31