Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00986 ATGGCGGTTCAGAGGATCACTTCCAACGAAGCACAAGCTTCGAAGAAGTTTGTGTGGGGAGCTGTTGCTGGTGCCTTTGGAGAAGGAATGATGCATCCAGTGGATACCATTAAAACCCGACTACAAAGTCAAGCTATTCTGAATGGACTTCAGAACCAGAAAAACATATTGCAGATGGTGCGATATGTCTGGCAGGTTGATGGACTAAAAGGCTTTTACAGGGGTGCAATACCTGGTATTACTGGATCTCTTGCGACTGGTGCAACATATTTTGGTGTCATAGAGTCCACAAAAAAGTGGATTGAGGATTCACATCCTAGTCTTAGGGGCCACTGGGCGAATTTCATTGCTGGAGCTGTTGGTAAGCAGATTTGA 375 0.4533 MAVQRITSNEAQASKKFVWGAVAGAFGEGMMHPVDTIKTRLQSQAILNGLQNQKNILQMVRYVWQVDGLKGFYRGAIPGITGSLATGATYFGVIESTKKWIEDSHPSLRGHWANFIAGAVGKQI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00986 124 Gene3D Mitochondrial carrier domain 2 124 IPR023395 -
Vimu10g00986 124 FunFam Mitochondrial substrate carrier family protein 3 124 - -
Vimu10g00986 124 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 10 122 - -
Vimu10g00986 124 SUPERFAMILY Mitochondrial carrier 12 121 IPR023395 -
Vimu10g00986 124 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 100 IPR018108 -
Vimu10g00986 124 Pfam Mitochondrial carrier protein 12 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00986 Vimu-Chr10 8981864 8983541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00986 15 108 EF-hand Containing Proteins AT2G35800 29.787 5.41e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00986 - - gmx:100790921 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00986 10 8981864 8983541 Vimu10g00986 10 8981864 8983541 ECH