Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00968 ATGGGAGGTGAGGAAAAGCGCCACCAGATGATGCAGAACCTCTTCGGCGACCAATCCGAGGAGGAGGAAGAGCTCGACGTCGATTCCGAGCACGAATCGAATCCCCAAATCAATTACCCCTCCGACGAGGGAGAGGGAATGGGGGAGCAGGAGGGAGAGGGCGAGGTGGAGGGCCAGGGGGAGGTGGAAATCGAGAGCGACGGAGACGGAGAAGCAGAACATGATCGCGAAAGCGAGGGCGAGAGGGAGCAGAGCTCGCAGGAGGTGGAAGTTGGAGAGAGAGAGGAAAGTGAGGGAAGAGACTCTGATAGTGACGCCAAAGACGACGGTTATAGCCAGCGTGGCGTCACGAGTAAGCGCCGCGATGACGTCGTTGAGAGCGGATCTGAAAGGTCGGAGGAGAATCATTACGATCACCACGACGATGAGGAGGAAGAAGTCGACGAAGCTAGAAGTCCCAGTGTGTCGCCCAGAGATGAAAAAGAAGATGAGACTCGTGACTTGCATTCGGCCCCTGAAATTCGTGATGTATTTGGTGATTTTGATGATGATGAAGAAGAGGAAATGGGGTATGCTGTTCAGCAGGACATTGAACAAGATTCAAATGTGAGTGAAGGTGCCAATAGTGACATTGGTAGATATCCTGTGGAGGAGGAAGGAAGCTACGGAAAGAACCTGAGACCAGAAGATATGCTTGCTGATGAAGATCATCAGTATGAATCAGAGGAGGAAAACTTTGAGATAAAAACTAAAGAGAAGCCACTTGGCCCCCCTTTAGAATTGGAAGTTCCATTACGACCTCCTCCAGCTCTTCCAGACAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTCGACCCTAAACCATTTGATCCTAAAACATATGTGGAAGAGGATACTTTTGTAACTGATGAATCTGGAGCCAGAAAGCGAATACGGTTGGAGAATAATATTGTACGTTGGAGGACTGCTAGAAATCCTGATGGCACAGCATCTTATGAAAGCAATGCCCGCTTTGTGAGATGGTCCGATGGCAGCCTACAGCTTTTAATTGGGAATGAAGTTCTTGACATATCAGTGCAAGATGCACAGCATGATCAAGCACATCTTTTCCTTAGACACGGAAAGGGAATCCTTCAATCACAAGGAAGGTTATTGAGGAAAATGAGGTTTATGCCATCTTCCTTGTCTTCAAATTCTCATCGGCTGTTGACTGCCCTTGTTGACTCAAGGCATAAGAAGGTTTACAAGGTTAAAAACTGCATTACTGACATTGATCCTGAGAGGGAAAAAGAGGAAAAAGAGAAGGCTGAAAGTCAAAATATTCGGGCTAATGTGCTTCTTAACCGAAAGCGTGAGAAGGTGAGCCGGAAGTATACTCCAGCTGTGGATAGGAGGCGGCAACTTTCTCCTGGGTTTTTAGAGGATGCATTGGATGAGGAGGATGAAGCAGATTACTATGATTCTCGTCGTTCTCAGCGCCGCTTTGAGGATGATTTGGAAGTGGAAGCCCGAGCAGAGAAAAGAATTATGAATGCTAAAAAGTCACAGGGACCTAGAGACATCCCTCGCAAGTCTTCTTTCCCACCTGCTAAATCCTCCCGAAATCCAGTGGATTACCAGGATGATGAGAGAGAGGAGTCTGAGTATGAAACCGAGGAAGAGGAAGATGAGAGGCCTCCTCCACGCAAGAGGGATGAGGATACTGAGCCAGAGTATGAGGACGATGAAGAAGAAGAACACTATGAAGAGGCAGAACAAGTTAATGATGCCTCAGATGAGGAGGAACCAAAGCAAAAGAGTAAAGAGTTTAGAGGCAGTGGCAAGAGGAAGGGATTTGAATCAGATGAGGAGTCTCCTCCAAGGAAAACAACCACCCATCGACGGATGGCAGTTGTGTATGATAGTGATGAGGAATAA 1923 0.4732 MGGEEKRHQMMQNLFGDQSEEEEELDVDSEHESNPQINYPSDEGEGMGEQEGEGEVEGQGEVEIESDGDGEAEHDRESEGEREQSSQEVEVGEREESEGRDSDSDAKDDGYSQRGVTSKRRDDVVESGSERSEENHYDHHDDEEEEVDEARSPSVSPRDEKEDETRDLHSAPEIRDVFGDFDDDEEEEMGYAVQQDIEQDSNVSEGANSDIGRYPVEEEGSYGKNLRPEDMLADEDHQYESEEENFEIKTKEKPLGPPLELEVPLRPPPALPDKMNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGARKRIRLENNIVRWRTARNPDGTASYESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKREKVSRKYTPAVDRRRQLSPGFLEDALDEEDEADYYDSRRSQRRFEDDLEVEARAEKRIMNAKKSQGPRDIPRKSSFPPAKSSRNPVDYQDDEREESEYETEEEEDERPPPRKRDEDTEPEYEDDEEEEHYEEAEQVNDASDEEEPKQKSKEFRGSGKRKGFESDEESPPRKTTTHRRMAVVYDSDEE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00968 640 Coils Coil 435 455 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 69 138 - -
Vimu10g00968 640 Pfam Leo1-like protein 277 436 IPR007149 GO:0006368|GO:0016570|GO:0016593
Vimu10g00968 640 MobiDBLite consensus disorder prediction 511 640 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 46 68 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 178 193 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 593 640 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 471 495 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 150 177 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 571 592 - -
Vimu10g00968 640 MobiDBLite consensus disorder prediction 1 227 - -
Vimu10g00968 640 PANTHER LEO1 PROTEIN 1 640 IPR007149 GO:0006368|GO:0016570|GO:0016593
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00968 Vimu-Chr10 8720479 8724521 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00968 K15177 - gmx:100791454 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00968 10 8720479 8724521 Vimu10g00968 10 8720479 8724521 ECH