Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00955 ATGGAAGACGACGACGAGTTCGGAGATTTATACACTGATGTTCTCCGCCCCTTCGCTTCGCCCTCATCCTCTGCGTCTCAACCGCATCAATCTTCTCCTGCGCCTTCTTCCATCGATCTCAACCTCAACCTAAACGCCGCTCAGATCCCCGGCGATGTGTCCATCGATATTTCCCCTGCATCCAACCAGCTTCCTCCCTCCGACACGCAAGAACCGCCTCCCGCTGCAGCCGAGGAGCCGACCAAAATTCCCGACGCAGAACCTCAGCCGGATTCAAACCTCGCCAGTGCAGACGCGGGAATTGATCCGATCGATAGGGACGTGAAATTTGACATCGAGGAGGAGGACGACGGTGGCGATGGCTCGCCAGTTATTCCGGGCCTGGCCGGTGAGGCACCGGCTGAAGAAGGCGGGGAGGGAGATGATTGGGATACCGATAGCGAGGATGATTTGAAGATAGTGTTGAATGAGAACAACCACATGGCCATGGAACGGGGAGGGATGGGGGAGGGTGACGAGGAAGAGGAAGATGGGGATGAAGAGCTTGTGATTGTGGCAGGTGGTGATCCGAATCAGAGTGTGGAGGAGCAGGAGTGGGGCGAGAATGCGGCCCTGGCTGCTGGGGACGGTGAGAGGAAGGATATCTCTGGCGAATTGGCCAAGGCTGGGGGTGCTGTGGTGCCGAAGCTTGGGTATAGCAATCATGGATATCACCCCTTTCATTCCCAGTTTAAGTATCAGTATGTTAGGCCTGGTGCAACACTAATGCCTGGAGCTACTTCTTCTGCTCCAGGTGGGGCTCCTGGTCAGATTCGTCCACTCCCCAACATGGCTGGTCGAGGTAGAGGGGACTGGAGACCACCTGGACTAAAAGTGCCTGCTGCTATGCAAAAAGGTTTTCATGGAGGTCCTGGATTACCTGGTTGGGGCAGTGGTACTGCAGGGCGTGGTTTTGGTGGTGGATTGGAATTCACACTTCCCTCTCACAAGACTATATTTGATGTTGATATTGAGAATTTTGAGGACAAACCATGGAAATATCCAAATGTTGATACATCAGATTTTTTCAACTTTGGTTTGAATGAGGAGAGCTGGAAAGATTATTGCAAACAGCTGGAGCAATTACGCTTGGAGTCTACAATGCAAAGCAAGATACGTGTTTATGAGAGTGGTCGAACAGAGCAGGAGTATGATCCAGACTTACCCCCTGAATTAGCTGCAGCTACTGGTATACATGATGTTCCGGTTGAAAATGCAAATTCTCAAAAGTCCGATGTCAGACAGAGTGATGTTATGAAAGGTTCTGGCACTGGACGTGTGCGACCACCACTACCAACTGGAAGAGCAATACAGGTGGAAGGTGGTTATGGAGACCGGCTTCCTTCTATTGATACCCGTCCTCCCCGAGTCCGTGACTCAGATGCAATCATTGAGATTGTTTTACAGGATACAGAAGATGACCATTCCTCTGCCGGATTTGCTCAAGATCCACCTGATGGTGGAGAACCCCATAGAGAGGATTTTAGAGAAGACCATGTAGCTGGAGACGAAATTCCAAGGTTGGAGTCAGAGTATTTTGATGGTTTCCCACAGGATTATAGTGGTCGAAAGAAGGAGCTTCCAGGAAGAAGAATGCCATTTATAAATTCCAGTCCTGCAAACACGGCTAATGGGGATGAAAAATTGTCATTCCCACAGGAAGAACCAATTGAGTACTCTGGTTCTAGGGGCCAAAATCATAGGTCCTATGGTGGCAATTTTAGCTCCTCTCATGATGAAAGGAAGATGCAAAGAAGAGTGCGTGGTCAGTCTCCTCCTATTACTCCTATTCAAGAATTAGCAGCTGATAATAAAAAAGAAGAGTCGGTGGAAAGCATGGAAGGTAAACATAATACACTTTCATCCCCTGTCATTAAAGACGCAAGGGAGTCCAGTATAGAAGACAAAGATACCGAACTTGAGGACACTGGGACAGCTGATGGAAGTTCCAAATTGGAAAAGGAGGAAACAGTAGACAAAGTAGAAACTCTTGAGGATGGGGTGGCAAAGAGACAGAAATTAACATCCCGAGTTGAGCAACATTTGCTGGATGATGTTGATGATTGGGAGGACTCAAAAGCTGCAAAAAGTAGTGATAACAGCAAAGCAAGATCAGCAAGCAGCAGGGATAACCATAAGCGGCGGGAAGGTTTTGAAGAAGAAGTAGTTCAGGATCCACGATCAGCACATCTGAGTGGCATCAGACCGCACCCTGATGAAATTGAGCAGGGATTTTATAGAAGAGAGCATGATGCCAAGCAAGAACCTGAACGAAATCGCATGATAATTAAAGGTAGAGAGAGACCATACACTTACAAGGACCGGCATGCTAGCTTAGGTCCTCAGTTGCACACAAATACTGATGGATTTGATGGACAAAAAGAAAGGGACAATTCTGACATGGATTGGGCACGGAGAGATGATGATCTCTATAGCAGAAGGGTTAGAAATGATGAACCAAGAAAGAGGGATAGGGCTAAGGTTCGAGAAAATGAGAGAAATGACAAAGAAGATAATATTCATTCTAGAAAACTATTGGATAATGGTAGCTACAGGGTTTCATATGAAAAGGATGTTGGTTATAGAGACTCAAGGCATAGGGAAAGAGATGAAGGCTTGAGGATGAGGTATGAAGCTGTGGAGGATTACCATGGCAAGAGGAGGAAGGATGAGGAATATCTTAGGAGGGAGCATATTGACAAAGAAGAAATTCTGCATGGCTACAGGGAAAATGCTAGTCGGCGCAGGAGAGAAAGAGATGAAGCTTTGGATCCACGAAAGAGGGATGACCTGCAAAGAACTAGAGATAACCCTGATGATCAATATGCTGCTAGACAGAAAGATGAGGCATGGGTATTGAGGGAGAGGGGTGATAGACAGAGAGATAGGGAGGATTGGCATCGGATGAAACAGTCTCATGAAGAACTCCTACCTAAGCGTGAAAGAGAAGAAGGGCGGAGTTCTGTAAGAAGTGGACGAGGAGCTGAAGAAAAAGCATGGGTTGGTCATGTTAGGGCTAAAGATGAACATAAACTTTCTGAGAAGGAATACCAATCCAGAGAAGCAATGCGTCACAATGATCAGTTGAAGAGAAGGGACCGAATTCAGGATGAAAGTCCACATCATAAGGGCCGCGACGATGCCTCTGTGCGCGGAAATCAATATACTACTGAGGAAAGGCGATCTAGGCAGGAAAGGTCAAGTAGTCGTAGTGATCGTGTTGCTAATGCTTCAGATAACCAAAAAGTTAAGCATAGAGAAGGCTCAAGGAAAAGCAAAGAACGTGATGTTAGTGACCCTAATAGTTTAGGCGTGTCCAAGAGAAATCAAGAAAATCAAAGTGGTCCAACCAATGAGAAGGGCTTGAAAGGATCTGGTGACGAAGACCGTGCTGAGCATGATATTCTAGGGCAACACTCATCCAGAAAACAGCGGGAAGACATTTCCTCAGATGATGAACAGCTAGATTCTCGCCGAGGACGTTCTAAATTAGAACGCTGGACAAGCCATAAAGAAAGAGATTTCAGTATCAACAAATCCTCTTCTTCGTTGAAGTTCAAAGACATTGATAAGGATAATAATAACAACAACGTTGGATCTTCTGAAGATGGGAAACCTGCGGATGATCCTGCTAAAACTGTTGATGTTAATAACCAACATGTCTTGTCGGCTGAAGCAAGGGATTCTGCAGATATGGAGAATAAGGATGCTGATACAAAAGAAATGGGAGATCGGCACCTTGATACAGTTGAGAGGTTGAAAAAGCGTAGCGAAAGGTTCAAGCTCCCTATGCCAAGTGAAAAAGAGGCCCCAGTAATCAAGAAGTTAGAAAGTGAACCTCTCCCTTTTGCCAAAACTGAAAATCCTGTAGATTCAGAAGTCAAACAAGAACGACCTGCCCGTAAAAGAAGATGGGTCACTAACTGA 3966 0.4639 MEDDDEFGDLYTDVLRPFASPSSSASQPHQSSPAPSSIDLNLNLNAAQIPGDVSIDISPASNQLPPSDTQEPPPAAAEEPTKIPDAEPQPDSNLASADAGIDPIDRDVKFDIEEEDDGGDGSPVIPGLAGEAPAEEGGEGDDWDTDSEDDLKIVLNENNHMAMERGGMGEGDEEEEDGDEELVIVAGGDPNQSVEEQEWGENAALAAGDGERKDISGELAKAGGAVVPKLGYSNHGYHPFHSQFKYQYVRPGATLMPGATSSAPGGAPGQIRPLPNMAGRGRGDWRPPGLKVPAAMQKGFHGGPGLPGWGSGTAGRGFGGGLEFTLPSHKTIFDVDIENFEDKPWKYPNVDTSDFFNFGLNEESWKDYCKQLEQLRLESTMQSKIRVYESGRTEQEYDPDLPPELAAATGIHDVPVENANSQKSDVRQSDVMKGSGTGRVRPPLPTGRAIQVEGGYGDRLPSIDTRPPRVRDSDAIIEIVLQDTEDDHSSAGFAQDPPDGGEPHREDFREDHVAGDEIPRLESEYFDGFPQDYSGRKKELPGRRMPFINSSPANTANGDEKLSFPQEEPIEYSGSRGQNHRSYGGNFSSSHDERKMQRRVRGQSPPITPIQELAADNKKEESVESMEGKHNTLSSPVIKDARESSIEDKDTELEDTGTADGSSKLEKEETVDKVETLEDGVAKRQKLTSRVEQHLLDDVDDWEDSKAAKSSDNSKARSASSRDNHKRREGFEEEVVQDPRSAHLSGIRPHPDEIEQGFYRREHDAKQEPERNRMIIKGRERPYTYKDRHASLGPQLHTNTDGFDGQKERDNSDMDWARRDDDLYSRRVRNDEPRKRDRAKVRENERNDKEDNIHSRKLLDNGSYRVSYEKDVGYRDSRHRERDEGLRMRYEAVEDYHGKRRKDEEYLRREHIDKEEILHGYRENASRRRRERDEALDPRKRDDLQRTRDNPDDQYAARQKDEAWVLRERGDRQRDREDWHRMKQSHEELLPKREREEGRSSVRSGRGAEEKAWVGHVRAKDEHKLSEKEYQSREAMRHNDQLKRRDRIQDESPHHKGRDDASVRGNQYTTEERRSRQERSSSRSDRVANASDNQKVKHREGSRKSKERDVSDPNSLGVSKRNQENQSGPTNEKGLKGSGDEDRAEHDILGQHSSRKQREDISSDDEQLDSRRGRSKLERWTSHKERDFSINKSSSSLKFKDIDKDNNNNNVGSSEDGKPADDPAKTVDVNNQHVLSAEARDSADMENKDADTKEMGDRHLDTVERLKKRSERFKLPMPSEKEAPVIKKLESEPLPFAKTENPVDSEVKQERPARKRRWVTN 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 802 858 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 572 586 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 1303 1321 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 17 48 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 484 863 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 159 179 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 898 1114 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 1135 1205 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 1115 1133 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 898 1321 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 1 147 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 641 787 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 1239 1288 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 418 472 - -
Vimu10g00955 1321 MobiDBLite consensus disorder prediction 499 523 - -
Vimu10g00955 1321 Pfam Fip1 motif 334 376 IPR007854 -
Vimu10g00955 1321 PANTHER FIP1[III]-LIKE PROTEIN 1 1321 IPR044976 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00955 Vimu-Chr10 8552703 8562996 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00955 - - gmx:100799266 2028.06