Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00943 ATGTCAATGCCACTGCTTGCACCTGAAAGTATGGAGGCTGAAGCATCGATTCCCTCAGATTCACTCCGGGGTCAGATTTCCAAATTTACTACCTTGGCCACTGAGGCTTACAAAAGAAAGCCAATCCATTATTGGATTTTTCTGTTTCTTGGCATCTTGGCAATGCTTGTGGCATTTCCTGCTTCCAGCATTGTGTCTCGTGTTTACTATGACAAGGGTGGGCAGAGCAAGTGGATCATATCTTGGGTGGCTGTTGCTGGATGGCCCATAACTGCCTTAATACTGTTTCCTGCATACTTTTTCAGTAAAACCTTTCCTACCCCTCTGAACCTGAAACTCATTCTGTCTTATATAATTTTGGGTTTCTTAAGTGCTGCTGACAACCTCATGTATGCTTACGCCTATGCTTACCTCCCTGCATCTACTGCCTCACTCGTGGCATCATCATCCCTTGTGTTTTCTGCACTATTTGGATATTTTCTTGTGAAGAACAAAGTGGATGCTTCAATAGTAAATGCTGTTTTTATCATAACTGCTGCATTGACCATCATTGCCTTGGACTCAAGTTCAGACAAATATCCCAATATCAGTGACAGTGAATACATCATGGGATTTGTATGGGATGTTTTGGGATCTGCTCTTCATGGGCTTATTTTTGCCCTCTCAGAGCTGCTCTTTGTGAGGTTATTGGGAAGAAGATCCTTCATTGTGGTTTTGGAACAGCAAGTCATGGTTTCTCTATTTGCTTTTCTGTTTACCACTGTAGGGGTAATTGTGAGTGGTGATTTTCAGGGAATGGCACATGAGGCTACCACTTTCAAAGGTGGTAGAGCTGCTTATGTTCTTATTCTTGTTTGGGGTGCAATCACTTTTCAGTTGGGGGTCTTGGGAGGCACTGCTGTTATTTTCTTGGGTTCTACTGTGCTAGCTGGTGTACTTAACGCAGTAAGAACACCCGTAACAAGCATTGCAGCTGTTATTCTGCTGAATGATCCAATGAGTGGTTTCAAGATCCTCTCCCTAGTGATCACCATTTGGGGCTTTGGCTCATATATCTATGGCAGTTCTATGAGGGAAAAAAATCATGAGAGTGTAGCTACATATTCTAGTCCATAG 1116 0.4292 MSMPLLAPESMEAEASIPSDSLRGQISKFTTLATEAYKRKPIHYWIFLFLGILAMLVAFPASSIVSRVYYDKGGQSKWIISWVAVAGWPITALILFPAYFFSKTFPTPLNLKLILSYIILGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNKVDASIVNAVFIITAALTIIALDSSSDKYPNISDSEYIMGFVWDVLGSALHGLIFALSELLFVRLLGRRSFIVVLEQQVMVSLFAFLFTTVGVIVSGDFQGMAHEATTFKGGRAAYVLILVWGAITFQLGVLGGTAVIFLGSTVLAGVLNAVRTPVTSIAAVILLNDPMSGFKILSLVITIWGFGSYIYGSSMREKNHESVATYSSP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00943 371 Pfam Purine nucleobase transmembrane transport 48 360 - -
Vimu10g00943 371 PANTHER OS09G0467300 PROTEIN-RELATED 38 363 IPR030182 GO:0015211|GO:0016020
Vimu10g00943 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 90 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00943 Vimu-Chr10 8442215 8445310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00943 1 348 Organic Solute Cotransporters AT2G24220 67.816 7.58e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00943 - - gmx:100790781 608.216