Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00942 ATGGATGATTGTGAATCAGGGCAAGCATCAAGGAAGAGCAAAGCCGCGGAGAGCCCAAGAGTAAGACCACCGCTGGTTCTGGCAGAAAAGAACAATGCAGCCACAGCAGCCACCACCAGACGCTCAACAACAAGGGAAGTTAGTTCTAGATATAAGTCACCCACTCCTGCTACTCCGTCTGGTACTCGTAGATGCCCATCACCAAACCTTACAAGAACGACGTCTGCATCAACCTCACAGTTGTTTCCAAAGAGGTCTCTCTCTGCAGAAAGGAAGAGGCCTTCAACTCCTCCCTCCCCAACTGCACGAAGACCTTCTACACCAACCAATGATGCATCTGTTGATGGGAAATTGTTGTCCAGAAGGGTCACGGGTAGCCGTTTGCCAGACAGTCTATGGCCTTCCACAATGCGAAGTCTGAGTGTTTCTTTCCAGTCAGATACCATTTCCATACCTGTAAGCAAGAAAGAGAAGCCGGCTGCTAGTGCTTCTGACCGCACTCTGCGACCGTCTTCAAATGTGGCGCACAAGCAGGCTGAAACTCCAACCGCAAGAAAGCCTACACCAGAGAGAAAGAGGAGTCCTCTTAGAGGGAAGAACGCTTCTGATCAGTCTGAGAATTCAAAGCCAGTTGATAGCTTGTCTTCTCGGTTGATAGATCAACATCGTTGGCCCAGTAGGTTAGGTGGGAAGGTATTCTCTAATGCATTGAACAAAAGCTTTGATTGTGCTGCTTTGAACACTTCAGTTCCGGGAACTGGTGTTTCTTCACCGAGAAGGTTGTCTATATCAGATGAATCACGTAAACCCTTGCAAAGGTCTTCCAGTGATGCTGTAAGGCTGGTATCACTTGTTGGAAGTGGCAGAATAGGAAGCGGGGTGAGATCAGTCGATGACTGCTCTCCACGGGAATTGAGACCTCACAAATCTGCTTCTGCAACTACAATTGCATTGGCTGGAGTTAGATCTCAGTCCTTGTCAACGCCAGGATCACGAGTGTCTTCACCGAGTAAGACCTCAGTGCTATCCTCTTCTAGTTCAAGAGGTGTCAGTCCATCTAGGTCAAGACCGTCAACTCCTCCTTCTAGAGGGGTCAGTCCTTCTCGAATTCGGCCAACCAATTCATCCATTCGATCAAACAATTCGATCTCAGTGCTCAGCTTTATTGCTGATTTTAAAATGGGGAAAAAGGGTGTATCCCACATAGAAGATGCTCACCAATTACGGCTTCTCTACAATAGATACTTGCAATGGAGGTTTGCCAATGCAAGAGCTGAGGATGTTCTTTATATCCAAAATGCAATTGTGGAGAAAACTCTCTATAATGTATGGATTACTACTTTGTCCCTGTGGGAGTCTGTGCTTAGAAAGAGGATCAATCTTCAGCAGCTAAAGCTTGACCTTAAGCTGAATTCTGTTTTGAATGATCAACTGATGACCTATCTTGATGATTGGGCTGTACTTGAAAGAGACCATATTGATGCTCTATCTGGAGCCGTGGAAGACTTGGAGGCCAGCACTCTTCGTCTTCCTGTAACCGGAGGAGAAATTGTATGTATGCTGGCAGATATTGAGCATTTGAAAGTTGCTATCTGTCAAGCAGTTGATGTCATGCAAGCAATGGGATCTGGTATCTGTTCCTTGCTCTCACAGGTTGAGGGCATGAACAGTTTAATTTCTGAAGTTGCTGTCATAGCAGTTCATGAAAAGACCATGCTTCACGAATGTGAAATGCTAATGGCTTCAGTAGCAGCTATGCAGATAAAGTGCACAAAGTTAAGTACTAGCACTAGACAAATTGAGATGGTAAGGCCTCTCCCACCTGTCTAG 1830 0.4607 MDDCESGQASRKSKAAESPRVRPPLVLAEKNNAATAATTRRSTTREVSSRYKSPTPATPSGTRRCPSPNLTRTTSASTSQLFPKRSLSAERKRPSTPPSPTARRPSTPTNDASVDGKLLSRRVTGSRLPDSLWPSTMRSLSVSFQSDTISIPVSKKEKPAASASDRTLRPSSNVAHKQAETPTARKPTPERKRSPLRGKNASDQSENSKPVDSLSSRLIDQHRWPSRLGGKVFSNALNKSFDCAALNTSVPGTGVSSPRRLSISDESRKPLQRSSSDAVRLVSLVGSGRIGSGVRSVDDCSPRELRPHKSASATTIALAGVRSQSLSTPGSRVSSPSKTSVLSSSSSRGVSPSRSRPSTPPSRGVSPSRIRPTNSSIRSNNSISVLSFIADFKMGKKGVSHIEDAHQLRLLYNRYLQWRFANARAEDVLYIQNAIVEKTLYNVWITTLSLWESVLRKRINLQQLKLDLKLNSVLNDQLMTYLDDWAVLERDHIDALSGAVEDLEASTLRLPVTGGEIVCMLADIEHLKVAICQAVDVMQAMGSGICSLLSQVEGMNSLISEVAVIAVHEKTMLHECEMLMASVAAMQIKCTKLSTSTRQIEMVRPLPPV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00942 609 MobiDBLite consensus disorder prediction 292 376 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 200 215 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 1 135 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 165 179 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 247 277 - -
Vimu10g00942 609 Pfam QWRF family 268 573 IPR007573 -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 316 376 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 1 18 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 32 85 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 183 199 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 247 261 - -
Vimu10g00942 609 MobiDBLite consensus disorder prediction 152 218 - -
Vimu10g00942 609 PANTHER AUGMIN FAMILY MEMBER 28 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00942 Vimu-Chr10 8433302 8436316 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00942 K25918 - gmx:100796917 815.839