Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00941 ATGGCCAAGTCAGGCAAAATGTCCAAACAGGTTGTGACTGAAATTCTCTTGAATTCAATCAGGACGGTCTTCGATAGAACTAGGCCAAGAAGGCCACACATGAAACTTAATCAATTGTTACAACTTTTCTTTGTTTTCTTTTGTTTTATTAGTGGTGGTTACAACATCAAGACAGGACCTGGCTGTATGATTGAACTCATGAAATTTGATATGGGCGGTTCTGCTGCAGTTTTTGGGGCAGCAAAAGCTCTTGGTCAAATCAAACCTCTTGGAGTGGAGGTCAATAACACAGATGCAGAGGGTAGGCTTACTCTTGCAGATGCTCTGGTGTATGCTTGTAACCAGGGTGCTGAAAAGATAGTGGACCTGGCAACATTAACTGGGGCCTGTATAATTGGTCTTGGATCCTCAATTGGAGGTGTGTTTACGCCAAGTGATGACCTGGCAAAAGAAGTTTTTGAAGCTTCAGAAGCGAGTGGGGAGAAACTATGGAGGTTGCCATTAGAAGAAAGCTACTGGGAGTCAATGAAATCAGGAGTAGCTGATATGGTGAACACTGGTGCTCGTCCAGGTAGTGCTATTACTGCGGCTCTTTTCTTAAAGCAGTTTGTTGATGAGAAGGTTCAATGGCTGCATATTGACATGGCTGGTCCAGTTTGGAATGAAAAGCAGCGCTGTGCAACAGGATTTGGTGTTGCTACTTTAGTAGAATGGGTTTTGAAGAACGCATCTTAA 735 0.434 MAKSGKMSKQVVTEILLNSIRTVFDRTRPRRPHMKLNQLLQLFFVFFCFISGGYNIKTGPGCMIELMKFDMGGSAAVFGAAKALGQIKPLGVEVNNTDAEGRLTLADALVYACNQGAEKIVDLATLTGACIIGLGSSIGGVFTPSDDLAKEVFEASEASGEKLWRLPLEESYWESMKSGVADMVNTGARPGSAITAALFLKQFVDEKVQWLHIDMAGPVWNEKQRCATGFGVATLVEWVLKNAS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00941 244 Pfam Cytosol aminopeptidase family, catalytic domain 48 88 IPR000819 GO:0006508|GO:0046872|GO:0070006
Vimu10g00941 244 Pfam Cytosol aminopeptidase family, catalytic domain 92 236 IPR000819 GO:0006508|GO:0046872|GO:0070006
Vimu10g00941 244 ProSitePatterns Cytosol aminopeptidase signature. 96 103 IPR000819 GO:0006508|GO:0046872|GO:0070006
Vimu10g00941 244 PRINTS Cytosol aminopeptidase signature 64 85 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vimu10g00941 244 PRINTS Cytosol aminopeptidase signature 40 57 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vimu10g00941 244 Gene3D Zn peptidases 91 242 - -
Vimu10g00941 244 SUPERFAMILY Zn-dependent exopeptidases 48 241 - -
Vimu10g00941 244 PANTHER LEUCINE AMINOPEPTIDASE-RELATED 48 89 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vimu10g00941 244 Gene3D Zn peptidases 47 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00941 Vimu-Chr10 8420470 8425776 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00941 K01255 - gmx:100808230 368.237