Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00938 ATGGTGGCGACGAACGTGAAGGCAGAAACCATGTCTCTCATGGACAAGCGTAGCGCGCTGGAGGCGGAGATGAACACCATCATCGTTCGCCTCTCCCAGCCCGGAGCTCCTGGTGTGTCCGGCGCTCTCCTCGATTCTGAGGGTTTTCCTCGTTCCGATATCGACATCCCCGCTGTTCGAGCCGAACGACGTCGCCTTGCAGAGTTGCGCAATGATCACAAGGAGAAAATAAACCAAAATATTCAAATTCTGCATTCTGCAAGGCTTGAGAGTAGGTCATCGGTCTACAAGAATCCAGGTAATGATGATGGTTCGGGTAGTCAGACCTCATCAACTACAGACACTGTTTCATCGATGACATCACAAAATGTCCTTATGAGACATTCCCCCAATTCAATGGATGTGGATGTGTTGATTAGTAGACCCTTTGCAATGGTAGACGAGATAGCGGATTCGTCTCCAGCAGTGGAGGATGGTTTACAACTTGGAGATCAAATTCTTAAATTTGGTGACGTGGAAGCAGGTGATAATTTGCTCCAAAGGCTTTCTTCGGAGGCTCAATCAAATATGGGTCGTGCAGTACCGGTTGTTATTGTGAGGCAAGGCATAGTGATAAACTTAACTGTTACACCTAGATCTTGGCAAGGCAGAGGACTACTGGGGTATGCCTGCTGTCCCTCTATTTTTTTTTTTGCTTTTGTTTAG 705 0.4738 MVATNVKAETMSLMDKRSALEAEMNTIIVRLSQPGAPGVSGALLDSEGFPRSDIDIPAVRAERRRLAELRNDHKEKINQNIQILHSARLESRSSVYKNPGNDDGSGSQTSSTTDTVSSMTSQNVLMRHSPNSMDVDVLISRPFAMVDEIADSSPAVEDGLQLGDQILKFGDVEAGDNLLQRLSSEAQSNMGRAVPVVIVRQGIVINLTVTPRSWQGRGLLGYACCPSIFFFAFV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00938 234 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 1 223 IPR035269 GO:0070682
Vimu10g00938 234 MobiDBLite consensus disorder prediction 92 120 - -
Vimu10g00938 234 FunFam 26S proteasome non-ATPase regulatory subunit 9 128 225 - -
Vimu10g00938 234 Coils Coil 59 79 - -
Vimu10g00938 234 Pfam Nas2 N_terminal domain 12 85 IPR040815 -
Vimu10g00938 234 Gene3D - 2 95 - -
Vimu10g00938 234 SUPERFAMILY PDZ domain-like 140 216 IPR036034 GO:0005515
Vimu10g00938 234 Gene3D - 126 224 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00938 Vimu-Chr10 8407395 8411206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00938 K06693 - gmx:100803329 334.724