Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00903 ATGTCGTTAGATGAAAGGACAAATCCACAAGCAGCAGCTGAACCTGTTCATGAAGATTTTATACCACCCTCCGACTGGGATCGCCAGGAAAATAGTGACACCCTCATTCTTATGCTTCCAGGGTTTAAAAAAGAGCAATTGAAGGTTCAAGTGTCCTCAAACCGTGTGCTAAGGTTGAGAGGTGAAAGAAAGATCAGTGATAACAAATGGCGTAGATTTCACAAGGAAGTAATCCTTTCTGATTCTCATGACACCACTGGAATCAATGCCAAGTTTGAAGCTGGAATGCTATACATAAAGCTTCCCAAACTCATCAAACCACCAACACCAACAAGTCCAACAACTGATGATGACCACAAACCAGATGCTACTCAACAACATGATCATGAAAAAGACTCAAAAGAGGACACAACTCATGAAGAATCCAAGATTGAGGAACAACCAAGACCAGTTCATGAAGAGTCTCAAGTGATGCTGCAAAAGGAAATGAGCAAAGCAGAAACTGAAGAGAAAAGTGAAGAAATGCAGGAAACTACACAAACAAGAGTGAAGGAGCAGAAGGAAGGTCATGAAGATTCAGAAATAAAAAGAGATAATGATGATGAGAAAGAGATGAGGGAAGTTGTAGCTTCTAAGGCTGAAGGAAGTGATGTTGAAGGGTTAAGTAGGATTAGTGTGGGGAAGATGAAGACAAGGCTGGAGGAGATTTCTGAGATGGTTTTGGAGGTTAAGAAGCAGAATAAGGTAGCCAACTTAGTTGTTCTTGTCTTTCTTGTGTTGCTTATTGGACTCTATGTAAAGAGTGTGGTCAAGTCATATTTTGCAGGACCCAAAAACCAAGACCTTTAA 849 0.4064 MSLDERTNPQAAAEPVHEDFIPPSDWDRQENSDTLILMLPGFKKEQLKVQVSSNRVLRLRGERKISDNKWRRFHKEVILSDSHDTTGINAKFEAGMLYIKLPKLIKPPTPTSPTTDDDHKPDATQQHDHEKDSKEDTTHEESKIEEQPRPVHEESQVMLQKEMSKAETEEKSEEMQETTQTRVKEQKEGHEDSEIKRDNDDEKEMREVVASKAEGSDVEGLSRISVGKMKTRLEEISEMVLEVKKQNKVANLVVLVFLVLLIGLYVKSVVKSYFAGPKNQDL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00903 282 MobiDBLite consensus disorder prediction 113 204 - -
Vimu10g00903 282 CDD ACD_sHsps-like 25 103 - -
Vimu10g00903 282 SUPERFAMILY HSP20-like chaperones 17 106 IPR008978 -
Vimu10g00903 282 MobiDBLite consensus disorder prediction 1 27 - -
Vimu10g00903 282 Pfam Hsp20/alpha crystallin family 28 108 IPR002068 -
Vimu10g00903 282 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 15 118 IPR002068 -
Vimu10g00903 282 PANTHER HEAT SHOCK PROTEIN 26 8 252 - -
Vimu10g00903 282 Gene3D - 4 106 IPR008978 -
Vimu10g00903 282 MobiDBLite consensus disorder prediction 104 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00903 Vimu-Chr10 8059269 8060319 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00903 - - vra:106757452 441.425