Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00902 ATGAACAAGGATAAGATCTTCGAGTTAGCAAAGGGGTTCAGGGGTAGAGCCAAGAATTGCATAAGGATTGCAAGGGAGAGAGTGGAGAAGGCCTTGCAACATTCTTACAGAGACCGTAGAAACAAAAAGAGAGACATGCGATCTCTTTGGATCCAAAGGATCAATGCTGGTACCCGTGTACATGGGGTCAATTATGGGAACTTTATGCATGGGCTGATGAAGGAAAACATCCAACTTAACAGAAAGGTTCTATCAGAGTTATCTATGCATGAACCCTATAGCTTCAAGTCTTTGGTTGATGTATCGCGAAATGCATTTCCAGGAAACAAGAATGTTGTGATTCCTCCTAGAAAAGTCGCTTTTTAG 366 0.4208 MNKDKIFELAKGFRGRAKNCIRIARERVEKALQHSYRDRRNKKRDMRSLWIQRINAGTRVHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKSLVDVSRNAFPGNKNVVIPPRKVAF 121
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00902 121 SUPERFAMILY Ribosomal protein L20 2 105 IPR035566 -
Vimu10g00902 121 ProSitePatterns Ribosomal protein L20 signature. 43 59 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 PRINTS Ribosomal protein L20 signature 1 30 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 PRINTS Ribosomal protein L20 signature 64 90 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 PRINTS Ribosomal protein L20 signature 31 60 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 FunFam 50S ribosomal protein L20 45 107 - -
Vimu10g00902 121 Gene3D - 1 44 - -
Vimu10g00902 121 Pfam Ribosomal protein L20 3 98 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 NCBIfam 50S ribosomal protein L20 3 102 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 Gene3D Ribosomal protein L20 45 106 IPR035566 -
Vimu10g00902 121 PANTHER 39S RIBOSOMAL PROTEIN L20 1 119 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 CDD Ribosomal_L20 5 100 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vimu10g00902 121 Hamap 50S ribosomal protein L20 [rplT]. 1 104 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00902 K02887 - gmx:100527387 242.276