Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00900 ATGTGTGGAGGATCCGGTCATTTCATCTCTGACTCTGTGATAGCTGCAGTTGTGATCGAAGGTTTTAAGAGTTATCGAGAGCAAATTTCCACAGAGCCTTTCAGCTCTAAAGTGAACTGTGTTGCCATCCGTTTTGTATTAAGTGATCTCTTTCAAAACCTACGTGGTGAAGATCGACAGGCACTACTCCATGAAGGAGCTGGACACCAAGTTTTATCTGCTTTTGTGGAGATTGTCTTTGATAATTCAGACAACCGTATCCCGGTTGACAAGGAGGAAGTGCGATTGCGTCGGACTATTGGTTTAAAAAAGGATGAGTATTTTCTTGATGGAAAACACATAACGAAAACTGAAGTGATGAACTTGCTGGAGAGTGCGGGGTTCTCCCGTTCAAATCCTTATTATGTTGTACAACAAGGAAAGGTATTGGCTCTTGGTATAGCATCATTAACCTTGATGAAAGACTCTGAACGACTGGACTTGCTGAAGGAAATAGGTGGTACTAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGCAGGAAACTGGCAAGCTGAAGGAACTAGATGAGGAAAAGGAGGAACTTAGAAAATATCAACAGCTTGACAAACAAAGAAAATCATTAGAATATGCTATTTTTAGCAAAGAAGTTCAAGATGCTCAGCAGAAGCTTACACAGTGTGCCTCTCTGCAATCATGGATTGTCACCGAGGATCGGAACGAACAAAAGGAAGAAGAACTTGAGGAAGAGGATTCATTTGGAGCATTGGACTGGTCACAGGTAAGAGGAAGGTGGCATGTGAGCGTCACGGGATTGGAACAACCTTCTGGGACAGATGGTGTTGGTTGTTGCCTAAAGAGATGCTCTAGATCCAGTGGTCACAGGAGAAATCTGAGACAGTGGCCGACAGCTAACAATGGACACAATGCCCGAAAAGACCGTACTTCGCTACAGGCTAGTTTTGGGTATCAAAATGACATGTTAGATTGGATAGAAGATGTTCGGGCCAAGGTTTCTGAAACATCAGCAAAAATGTATAATGATGTTCTTGATGCCCATGAGAAATCCAAAGATTTAGAGAATACATTAAAAGATGTATCAAAAGAACTTCAAAACTTTAACAAAGAAAAAGAAGCTATTGAAAAGCGACGAACAGTGGCATTAAAGAAGAACACAGAGCTTGAGCTTGATGTCAAAGACTTGCAAGAGAAGATCTCTGGAAACATCCGAGCCAAGGAAGATGCTGCAAGACAACTGGAGATACTTGAGAAAGAAATTCAAGATTCAACCATTGAACTGGGCAAAATCATTCCCTTACATGAGGATCAAATTCAGAAAGAAAAAGACATTACCATGCAGGCCGGAGTTACCGATATTGACACTGGGTTGATTTTATATCTTATGTTTTTGGGAGACCCAAGTAATGCAAGTGACTGTGATAATGACTGCAAGGAGAATTGGACAGTGCTCGACAAGCGCATCGGCAAGCATTTTGATGTGAAGGAGAGTGTTGTAGATTACAGTGCTGTATGCAGCTGGGCTTTGTACACTGGACTAACTTTTGCAACGTTGCAGTTGGCTTCACTCAGAAATCAGAAAGGAATCTTAGAAGAAGATAGAGTAGAGTATACTGCCATCAGGATATCGGTTCCCAACTGTGTAAAAGTTGACAAAGAGTATTTCATTCTCTTAGCTTCCTTTGAGATCGAGTACGAGTGGCAGTGTTTGAGGAAGATGGAGTACAGTATTCGGCCAGGATATTGA 1773 0.4168 MCGGSGHFISDSVIAAVVIEGFKSYREQISTEPFSSKVNCVAIRFVLSDLFQNLRGEDRQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKVLALGIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGKLKELDEEKEELRKYQQLDKQRKSLEYAIFSKEVQDAQQKLTQCASLQSWIVTEDRNEQKEEELEEEDSFGALDWSQVRGRWHVSVTGLEQPSGTDGVGCCLKRCSRSSGHRRNLRQWPTANNGHNARKDRTSLQASFGYQNDMLDWIEDVRAKVSETSAKMYNDVLDAHEKSKDLENTLKDVSKELQNFNKEKEAIEKRRTVALKKNTELELDVKDLQEKISGNIRAKEDAARQLEILEKEIQDSTIELGKIIPLHEDQIQKEKDITMQAGVTDIDTGLILYLMFLGDPSNASDCDNDCKENWTVLDKRIGKHFDVKESVVDYSAVCSWALYTGLTFATLQLASLRNQKGILEEDRVEYTAIRISVPNCVKVDKEYFILLASFEIEYEWQCLRKMEYSIRPGY 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00900 590 Pfam RecF/RecN/SMC N terminal domain 14 131 IPR003395 -
Vimu10g00900 590 Coils Coil 352 407 - -
Vimu10g00900 590 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 327 455 - -
Vimu10g00900 590 CDD ABC_SMC3_euk 14 169 IPR041741 GO:0005524|GO:0016887
Vimu10g00900 590 Coils Coil 415 435 - -
Vimu10g00900 590 Gene3D - 14 272 IPR027417 -
Vimu10g00900 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 414 IPR027417 -
Vimu10g00900 590 Coils Coil 181 201 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00900 K06669 - vum:124821317 372.859