Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00884 ATGGAAGTGCAGAATAAATACATAGTGATAAAGCATCACATTGAAGATGCACCCAAAGAAGCCATCTTTGAGCTTAAAACTGGGACAATAGCTCTGTCCGTTGCGCCAGGTTCTGATGATATCATAGTCAAGAATCTCTACATTTCTATCGACCCTTACCAGATTAACCGCATGAAACTTTCTAGTTCCTCCCAGGGTACTTCAAGCTTTGCAGCACCCATAAATCCAGGCGAGGCCATTGATGGTGCTGTTATTGGAAAAGTTGTGGCTTCTGGGAATGCTAAGTTTCAGAAAGATGATTTGGTGCTTGGAGTATTCACATGGGCACAGTACAGTTTGGTGAAAGAAGGGAGTATCTTGAGAAAATTAGAGTCCTCTGAATTTCCACTGTCATATTATCTTGGAGTTCTGGGTAATAATGATTTGCTCCGATTCAACGGACTGTCAGCTTATGCGGGGTTTTTTGAATTGTGTAAACCCCAAAAGGGTGAAAAGGTTTTTGTCTCTGCAGCTGGTGGAGCAGTTGGAAATTTAGTAGGCCAATATGCAAAGCTTTTAGGTTGCTATGTTGTTGGTTGTGCAGGTACCCAGAAAAAGGTGGAATTGCTTAAAAAAGAGCTAGGTTTTGACGAAGCATTCAACTACAAAGAAGTAAAAGATCTAAACTATGCTCTTAAAAGGTATTTTCCTGATGGGATTGACGTATATTTTGACAATGTTGGGGGTGAGACGCTGGAAGCAGCTGTGGCTAATATGAGGATATTTGGAAGAGTGGCTGTTTGTGGGGTAATATCTGAGTATAGTAGTGGTGGAAGAAAAGCTTCACCAAACATGTTGGACATTGTGTACAAGAGAATCAGCATCAGAGGATTTTTGGCTGCTGATTTTCTGAATGTTTTTGAAGATTTTTTTTCAAAAACTTCGGATTACCTTCGTACAGGAAAGTTAAAGACAATTGAAGACATTTCATCAGGCGTGGAGAGCATCCCTTCTGCTTTTGTTGGACTCTTCAAAGGGGATAACATTGGAAAGAAAGTTATAAGTTTAGCAGAAGAGTGA 1059 0.4032 MEVQNKYIVIKHHIEDAPKEAIFELKTGTIALSVAPGSDDIIVKNLYISIDPYQINRMKLSSSSQGTSSFAAPINPGEAIDGAVIGKVVASGNAKFQKDDLVLGVFTWAQYSLVKEGSILRKLESSEFPLSYYLGVLGNNDLLRFNGLSAYAGFFELCKPQKGEKVFVSAAGGAVGNLVGQYAKLLGCYVVGCAGTQKKVELLKKELGFDEAFNYKEVKDLNYALKRYFPDGIDVYFDNVGGETLEAAVANMRIFGRVAVCGVISEYSSGGRKASPNMLDIVYKRISIRGFLAADFLNVFEDFFSKTSDYLRTGKLKTIEDISSGVESIPSAFVGLFKGDNIGKKVISLAEE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00884 352 Gene3D - 8 347 - -
Vimu10g00884 352 Pfam N-terminal domain of oxidoreductase 6 117 IPR041694 -
Vimu10g00884 352 Pfam Zinc-binding dehydrogenase 174 300 IPR013149 -
Vimu10g00884 352 Gene3D - 136 318 - -
Vimu10g00884 352 SMART PKS_ER_names_mod 28 347 IPR020843 GO:0016491
Vimu10g00884 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 145 315 IPR036291 -
Vimu10g00884 352 PANTHER PROSTAGLANDIN REDUCTASE 3 348 IPR045010 GO:0016628
Vimu10g00884 352 FunFam Prostaglandin reductase 2 142 318 - -
Vimu10g00884 352 SUPERFAMILY GroES-like 3 140 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00884 Vimu-Chr10 7879754 7882095 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00884 - - gmx:100808819 585.489