Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00876 ATGGCGTCACTCATAGCTGTGTCGCAGACCCAATTGCTGTATATTAAGCCCCGTTTGGTGTCGCCGCCTCATCAATCACGCTCCCTTTTCTTGCCAACGGGGTTACCAGCCAGATTTCGAGGGGTCCGGGCTACCATGCCGAGAAAGGCGGTTATTGTGTCGGCGGCGACGGCTGAGACGCCGAAGAAGAAGGGGGAGTCGAAGGGCTTCGTGGAGGAGATGAGGTTCGTGGCGATGAGGCTGCATACCAGGGACCAGGCCAAGGAGGGGGAGAAGGAGGTGAAACAACCCGAAGAGAAAGCCGTTACCAAGTGGGACCCAACTGTTGAAGGGTACCTCAAGTTTCTTGTGGATAGTAAGGTCGTTTACGACACGTTAGAAGACATCGTTCAAGAGGCTCCTCATCCTTCTTATGCTGAATTCAGAGAGACTGGATTGGAAAGGTCTGAAAGTTTGAAAGAAGATTTGGAGTGGTTCAAGGAGAAAGGTTATACTATTCCTGAACCTTCTTCTCCAGGACTTACCTATGCACAATATCTTAAGGAATTATCCGTGAAGGATCCTCAAGCATTCATTTGCCACTTTTACAACATCTACTTTGCTCATTCAGCTGGTGGTCGAATGATCGGGAGAAAGGCGCATTCATATCTGGGGACATATTCTCATTTGTCCTCTCCCTATGGATCGTTTACCACTCTATATTTCTCCTCTGAGAATGTTGCTGAACAGTTACTTGACAACAAGGCATTAAAGTTCTACAAATGGGACGGTGACCTTCCCCAGTTGTTGCAGAGCGTGAGGGACAAATTGAATAAAGTTGCTGAAGGTTGGACTAGGGAAGAAAAGAACCATTGTCTGGAAGAAACAGAGAAGTCGTTCAAGTTATCGGGAGAGATTCTCCGACTGATTCTATCGTGA 918 0.4782 MASLIAVSQTQLLYIKPRLVSPPHQSRSLFLPTGLPARFRGVRATMPRKAVIVSAATAETPKKKGESKGFVEEMRFVAMRLHTRDQAKEGEKEVKQPEEKAVTKWDPTVEGYLKFLVDSKVVYDTLEDIVQEAPHPSYAEFRETGLERSESLKEDLEWFKEKGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGRKAHSYLGTYSHLSSPYGSFTTLYFSSENVAEQLLDNKALKFYKWDGDLPQLLQSVRDKLNKVAEGWTREEKNHCLEETEKSFKLSGEILRLILS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00876 305 SUPERFAMILY Heme oxygenase-like 78 303 IPR016084 -
Vimu10g00876 305 CDD HemeO 69 303 IPR002051 GO:0004392|GO:0006788
Vimu10g00876 305 PIRSF Heme_oxygenase_decyc_plant 228 305 IPR016951 -
Vimu10g00876 305 PIRSF Heme_oxygenase_decyc_plant 17 224 IPR016951 -
Vimu10g00876 305 PANTHER HEME OXYGENASE 1, CHLOROPLASTIC-RELATED 48 304 IPR016951 -
Vimu10g00876 305 Pfam Heme oxygenase 106 301 IPR016053 GO:0004392|GO:0006788
Vimu10g00876 305 Gene3D - 60 304 IPR016084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00876 Vimu-Chr10 7815438 7818105 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00876 K21480 - gmx:547613 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00876 10 7815438 7818105 Vimu10g00876 10 7815438 7818105 ECH