Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00828 ATGGATAATATATTCAAACTTTGGTTTGCATTATTAACAATTATTCGTGTATCTGAGTCAACCTCAATACTTAGTATCCCATTGTACCATAGAGCAATTGTGAAACGTGAGACAGTGATGGAGCATGATGAGCCTAATGCAGAAGCCACAACAAATATATTCCCTGCAGATGATGTGTATGCCATGTTCTTGGGGGTGGGAACACCAGTGCAAATTGTGTTCCTTATGATTGACATAGGGAGCCCCATCACATGGTTCCAGTGCGGCCCCTGCACGCACTGCTACCCCATGCGTCGCCCTCTCTTCAACTCACCTGCATCAACCTCCTTCAGACAACTTGGCTGCTACGACGACACATGTCTCATTCCAATGATGAGGGGTATTTTTGGAAACTGCAAAGGATGGAATTGTAGATACAATGTAGAATATGACATGAAATCTCAATCTCGTTCCTTTGGTGTCATGGTTATTGACACCCTTAACTTTGAGCACTCTAATGTTGAAGTCAACGACTTCGTAATGGGTTGTGGGAACTCTTATGAGAGTCCCTTTAAGACTCAGTTTTCGGGAGTTTTAGGTCTCGAACGAGGTCCACTTTCAATTCAAAATCAGCTTCATTCGAAGGCCTTTTCCTTTTGCATAGTGAGTCTTGGATCGGAGAAACCTTCCTCTCTTGTGTTTTATGAGACATTACCCAAATAA 702 0.4274 MDNIFKLWFALLTIIRVSESTSILSIPLYHRAIVKRETVMEHDEPNAEATTNIFPADDVYAMFLGVGTPVQIVFLMIDIGSPITWFQCGPCTHCYPMRRPLFNSPASTSFRQLGCYDDTCLIPMMRGIFGNCKGWNCRYNVEYDMKSQSRSFGVMVIDTLNFEHSNVEVNDFVMGCGNSYESPFKTQFSGVLGLERGPLSIQNQLHSKAFSFCIVSLGSEKPSSLVFYETLPK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00828 233 ProSiteProfiles Peptidase family A1 domain profile. 60 233 IPR033121 -
Vimu10g00828 233 SUPERFAMILY Acid proteases 56 227 IPR021109 -
Vimu10g00828 233 Gene3D Acid Proteases 40 227 IPR021109 -
Vimu10g00828 233 PANTHER OS07G0603500 PROTEIN-RELATED 42 227 - -
Vimu10g00828 233 Pfam Xylanase inhibitor N-terminal 60 227 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00828 Vimu-Chr10 7343698 7344399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00828 52 215 Miscellaneous Gene Families AT1G77480 25.989 2.18e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00828 - K22683 var:108330182 386.726