Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00816 ATGGCAGAAGGGGGAAATAGAAGTCCAGTTAGCACCCACTTGGAGCCTAACCCTTTTGGTGAAGCTCATCCTTATCCAATGTCAAATAGCACATCCTCCTCTTCATCGTCACAAAACCCCTTCTTATTCGTGGGTGATGCCACCAAAACTAACAATGTTGGTGCATATGCAAATCAAACGGAGCATGACAATCTACATTCATTTTCTGCCATGAATCAAGAAAGAAGTGGCATGACTAACAATAGTGTTAATGGACTTCCGGGTGGTCTGCTAGACTCCCATTTATCAATGTCACCGCATACCAATGAATCATCACTAGGGAATCCCTTCCATGTGCCAACAAGTTCAACCGTTGGTAGTGAAGGTCATTGGAGCATGCCTAGTAGCGAAGCAAGGACACAGCCTTTTAACACGCATGGTGAAACACTTGATCCCTTTCCAGGCCAACTATCAGACCCCTTCTTCTCATTAGAATCAGCAAAAAACCAACAACGAGCTGATGCTACTACCACCCCAATGAGTGAACAGCATGACCCATTTTCAGTTACAAATGAAAGACAACCCAATTCTGCAAACTCTGCCACGAAAACACCTCAAAAACGGGGAAAGGATGTTAAGTTCGCTACCGAAACATGTGATGATGATATCCCAATCAGTTCTTTTCCCAACCATGGACAACAACATAGTGATGGTTTGCCTGCCTTCGGCAATGGCTCAGAAAAACAAAATCCTCCGATACAGGTAATGGAGCGTCCAGAGAATCCTTCATCTTCTTCCGATTATAGGTTTCCATCTCATGTGTTTGATAGACACAAATCAAACACCCAATGGAGCACTGCCTCTAATGAATCATTGTTCAGCATTCAAATGGGAAACACGAGTTTCTCAAGTGATTTGGGTTGGATTACTAAATCTGGCGAAATGGATAGACTCAGTGACATGAACACGTCTGGTTCACCATTTCATGGAAACCAGCCCCCACTCCCACCTCAACTCCAATCCCCAGCAACAAAATTCACTGATATGTGCCATAGCACTGCCAAACAACATGAAGGTTCAAAAGTGACTGAAGAAAAAGCTGCCGAGACAATGAGAGAGGTTATAATGGAAAGCAGCATAAGAAGAAGTAGCCTAAGTAACACCGATTTGACATATCCTGGACGGGCATCATGTTCTGATATGCATTGTAGTTCTGGCACTCATTCTCGTCATTCAGATGGCAGCACCATATCCTTTGCGTTCAATGTGTAA 1251 0.4373 MAEGGNRSPVSTHLEPNPFGEAHPYPMSNSTSSSSSSQNPFLFVGDATKTNNVGAYANQTEHDNLHSFSAMNQERSGMTNNSVNGLPGGLLDSHLSMSPHTNESSLGNPFHVPTSSTVGSEGHWSMPSSEARTQPFNTHGETLDPFPGQLSDPFFSLESAKNQQRADATTTPMSEQHDPFSVTNERQPNSANSATKTPQKRGKDVKFATETCDDDIPISSFPNHGQQHSDGLPAFGNGSEKQNPPIQVMERPENPSSSSDYRFPSHVFDRHKSNTQWSTASNESLFSIQMGNTSFSSDLGWITKSGEMDRLSDMNTSGSPFHGNQPPLPPQLQSPATKFTDMCHSTAKQHEGSKVTEEKAAETMREVIMESSIRRSSLSNTDLTYPGRASCSDMHCSSGTHSRHSDGSTISFAFNV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00816 416 MobiDBLite consensus disorder prediction 116 141 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 397 416 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 159 198 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 159 264 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 1 45 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 240 263 - -
Vimu10g00816 416 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 13 416 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 24 45 - -
Vimu10g00816 416 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00816 Vimu-Chr10 7218253 7219503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00816 - - vra:111240611 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00861 7 8450844 8451953 Vimu10g00816 10 7218253 7219503 PCT