Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00807 ATGGGAGGATCAACCAGTACAGAGGATGTAAATTTGTCACAGAAGCGGAAGACACCGAAAAGGAAGAAACAAGGTAATACTGTTGAGTATGAAGATCCTGATTTTTCACTGGATAATTCTTCACCAAAGATGGATGCTACTATAAATTACCCATTCAAACGGAAGAAGACAACACATAATCCTATTGAAGGCAATAATAGTGGTTGTGGCACTTCAGAGAATACTTTTTCACCAAAAGCTTCTGTTCCTGCATTGGGTATGCAGTCAGGACATCCAATTCAATGTTTTTCCACTGATCCAATAACAAGTCAATCTTGTGAGGAAGTGGGTTTTTGTCAAGGAGGCCATGAAGAAAAGGAGCAAAAGATGATAAATGCAACTGCAGAAAAAGCTTCCTCACCTGCATTGGATATGCTGTCAGGACATCCAATTCAGTGTTTTTCCACTGATCCAATAACAAGTCAATCTTTTGAGGAAGTGGGTTTTTGTCAGGGAGATCATGAAGAAAAGGAGCAAAAGATGAGCAATACAACTGCAGCGAAAGCTTCCACACCTGCATTGGATATGCTTTCAGGACATCCAATTCAATGCCTTTCCGCTTATCCAGTAACAAGTGAACCTTGTGAGGAAGTGGGTTTTTGTCAGGGAGGTCCTGATGAAAAGGAGCGGAAGATGATCAATGCAACTGCAGCAAAATCTTCAACACCTGCATTGGATATGCTGTCAGGACATCCAATTCAATGTTTTTCCACTGATCCAATAACAGGTCAATCTTGTGAGGAAGTGGGTTTTTGTCTGGGAGATCGTGAACAAAAGGAGAAAAAGATGATCAATACAACTGCAGCAAAAGCTTCCTCCCCTGCATTGGATTTGCTCTCAGGACGTCCAATTCAATGCTTTTCCACTGATCCAATAACATGTGAATCTTGTGAGGAAGTTGGTTTTTGTCAGGGAGATCATGAAGAAAAGGAACAGAAGACAATGGATACAACTGCAGAAAAGCAGCATAACGTTCCAGAAGTAAGCTGCAACCACACTTCTGTTGCAGCAAGTCCAGAGCCTTTTTCGAAAGAGTGTGTGCCAGAAGTTGTCAAATTTAGTACTGAGCATAGCATAAATGATAACATTTCCAACCCGGAGGATAAGAATTTTGTAAATGATACAAGTATGATGAAGGAAGATATTGATGACCCAGCAGATTATGAATTGTCCGATAAAAACATGTGTTACAAAGCCTGTACAAGGAGACAAATGGTTGATGCTGATTGTAGGAGAAGCAGTGGTGACCGTGGTCCTGAAAGTGCTAACAAGGAACCAACTTTTCAGGATCATGACAATGATCATTCACAACAATTTTCTGATGGATCATTGAGAGTTGGCTTGATGGATGGAGAAACGAAACTTTCATTTGATCAAGTTACCTCACATAGTGGAGCTGCACCTGAGGAAATAAAGTTGAGCACTGGCATCATTGATGAGCAAAGATTTATCAGTACTTCTGTTGTAGACATTCCTGTGGAACATCTCGAAGCAGATGGTAGACAACAGGATGATACAGAGATTACAAGAAGCAATCTGTGTTCTGCAGGTGAGCAAATAGAGTTGAACACTGACAACATTGATGAGCAAAGGTCTATGACTGCCTCATCTGCTGTTGGCATTCATGTGGAGCAAGTTGAAACTAATGGTAGACAGCTAGATCATGCGGAGATTACAAGAAATGATCTGTGTTGTGCAGGTGATGTTTCTGATTTAAGCTTAGACACAGTAAGAGATAGTCATTTAAAGATTTCACAATTCTCACTAGACAGAAGTGGTTTGGGGAACCCAAAGAAGAAGCTTCTCATCCTTGATGTGAATGGACTGCTTGCTGATTTTGTCAGTATCTATGATACTAGAACAAGATATAGACGAGAACGAGAGCCAGATTTTATACTGAAAGGGAGAAAAGTCTACAAGAGGCCCTTTTGCGAGGATTTTCTACAGTTTTGCTTTGACAGATTTCATGTAGGAGTATGGTCTTCTAGAGCCAAGTGCAATGTTGATGAAGCAATCAAATTTCTTATGGGGAAATCTGCATCCAAACTTCTCTTTTGTTGGAATCAGTCCCACTGTACTACAACTGAATTCACTACTGTTGAGGATATACACAAGCCCCTTGTGTTGAAGGAACTTAAAAAATTGTGGGAAAAGGAAGAACCCGATCTACCATGGGAGAAGGGAGAGTTTAACGAGTCCAACACATTATTATTGGATGACTCCCCTTACAAGGCACTAATGAATCCTACGCATTCAGCTATATTTCCTTATTCTTACCGATACTTCTACACCAGAGACTCAGAATTAGGACCAGAAGGTGATCTTAGGATTTATCTAGATGGGTTAGCTTTAGCTGAGAATGTAAGAAAGTACGTGTCAGAAAATCCTTTTGGGCAACGGCCGATAAGAGAAGCAAATCCATCATGGGGTTACTACCGTAGAGTTATAGAATCAGTTCAAAAGAAGCGATCAGGCACTGCATTTGTTTAA 2529 0.4053 MGGSTSTEDVNLSQKRKTPKRKKQGNTVEYEDPDFSLDNSSPKMDATINYPFKRKKTTHNPIEGNNSGCGTSENTFSPKASVPALGMQSGHPIQCFSTDPITSQSCEEVGFCQGGHEEKEQKMINATAEKASSPALDMLSGHPIQCFSTDPITSQSFEEVGFCQGDHEEKEQKMSNTTAAKASTPALDMLSGHPIQCLSAYPVTSEPCEEVGFCQGGPDEKERKMINATAAKSSTPALDMLSGHPIQCFSTDPITGQSCEEVGFCLGDREQKEKKMINTTAAKASSPALDLLSGRPIQCFSTDPITCESCEEVGFCQGDHEEKEQKTMDTTAEKQHNVPEVSCNHTSVAASPEPFSKECVPEVVKFSTEHSINDNISNPEDKNFVNDTSMMKEDIDDPADYELSDKNMCYKACTRRQMVDADCRRSSGDRGPESANKEPTFQDHDNDHSQQFSDGSLRVGLMDGETKLSFDQVTSHSGAAPEEIKLSTGIIDEQRFISTSVVDIPVEHLEADGRQQDDTEITRSNLCSAGEQIELNTDNIDEQRSMTASSAVGIHVEQVETNGRQLDHAEITRNDLCCAGDVSDLSLDTVRDSHLKISQFSLDRSGLGNPKKKLLILDVNGLLADFVSIYDTRTRYRREREPDFILKGRKVYKRPFCEDFLQFCFDRFHVGVWSSRAKCNVDEAIKFLMGKSASKLLFCWNQSHCTTTEFTTVEDIHKPLVLKELKKLWEKEEPDLPWEKGEFNESNTLLLDDSPYKALMNPTHSAIFPYSYRYFYTRDSELGPEGDLRIYLDGLALAENVRKYVSENPFGQRPIREANPSWGYYRRVIESVQKKRSGTAFV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00807 842 ProSiteProfiles FCP1 homology domain profile. 608 795 IPR004274 -
Vimu10g00807 842 SUPERFAMILY HAD-like 608 785 IPR036412 -
Vimu10g00807 842 PANTHER DULLARD PROTEIN PHOSPHATASE 382 804 - -
Vimu10g00807 842 Gene3D - 585 810 IPR023214 -
Vimu10g00807 842 SMART forpap2 611 779 IPR004274 -
Vimu10g00807 842 MobiDBLite consensus disorder prediction 420 453 - -
Vimu10g00807 842 MobiDBLite consensus disorder prediction 420 451 - -
Vimu10g00807 842 FunFam Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 571 811 - -
Vimu10g00807 842 MobiDBLite consensus disorder prediction 1 46 - -
Vimu10g00807 842 Pfam NLI interacting factor-like phosphatase 613 802 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00807 Vimu-Chr10 7122786 7126610 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00807 - - vum:124842253 1427.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00807 10 7122786 7126610 Vimu10g00807 10 7122786 7126610 ECH