Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00798 ATGTCGGAAACAGGAGCGACGACGATTCTGAAGGAGGAGGTGGACATAGTCATCCCCACAATAAGGAACCTGGAGTTCTTGGAGAAGTGGAGAGCGTTCTTTCAGCCTTACCACCTCATAATAGTGCAAGACGGTGACCCTTCTAAGGTCATCAAGGTCCCCGAAGGCTTCGACTACGAACTCTACAACCGTAACGACATCAACCGCATTCTGGGCTCCAAGAGCCATTGCATTTCCTTCAAGGACTCTGCATGCCGCTGCTTCGGCTTCTTGCTCTCCAAGAAGAAGTACATCTTCACCATCGACGATGATTGCTTTGTTGCAAAAGATCCATCTGGGAAAGAAATTAACGCCCTGGAACAGCATCTGAAGAACCTTCTGACTCCATCAACCCCGTTTTTCTTCAACACCCTCTATGATCCGTTTAGAGAGGGTACAGATTTTGTCCGTGGATACCCTTTTAGTCTGCGTGAAGGTGTTCCTACAGCTGCTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCGCCAACTCAGCTTGTCAAACCTCTGGAGAGGAACACCAGGTATGTGGATGCAGTAATGACCATACCAAAGGGAACCCTGTTTCCCATGTGTGGAATGAATCTGGCATTCAACCGTGAATTAATTGGTCCTGCAATGTACTTTGGACTGATGGGAGATGGTCAACCTATTGGACGGTATGATGACATGTGGGCTGGTTGGTGCATGAAGGTGATAAGTGATCATCTAGGATTCGGGGTGAAGACAGGTTTGCCTTACGTGTGGCACAGCAAAGCGAGCAACCCATTTGTAAACCTGAAGAAGGAGTACAAAGGAATATATTGGCAAGAAGAGCTGATTCCATTTTTCCAATCTGTTTCTCTTCCGAAGGAATGCACAACAGCTGAGAAATGCTACGTTGAACTGTCGAAGCAAGTGAAGGCAAAACTTGGGAAGGTTGATGAGTATTTCAACAAGCTTGCAGAAAACATGGTAACTTGGATTGAAGCTTGGGAGGAACTAAACCCTTCTTCTGTGCCATCAAAATCTGATGTATTGCCCAATGGCTCTGCCAAGTAA 1086 0.4659 MSETGATTILKEEVDIVIPTIRNLEFLEKWRAFFQPYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGSKSHCISFKDSACRCFGFLLSKKKYIFTIDDDCFVAKDPSGKEINALEQHLKNLLTPSTPFFFNTLYDPFREGTDFVRGYPFSLREGVPTAASHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVISDHLGFGVKTGLPYVWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKECTTAEKCYVELSKQVKAKLGKVDEYFNKLAENMVTWIEAWEELNPSSVPSKSDVLPNGSAK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00798 361 PANTHER UDP-ARABINOSE MUTASE 2 347 IPR037595 -
Vimu10g00798 361 PIRSF UPTG 4 348 IPR004901 GO:0016866|GO:0071669
Vimu10g00798 361 CDD Glyco_tranf_GTA_type 16 110 - -
Vimu10g00798 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 14 246 IPR029044 -
Vimu10g00798 361 Pfam Reversibly glycosylated polypeptide 10 344 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00798 Vimu-Chr10 7066642 7067996 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00798 K13379 - gmx:100816315 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00798 10 7066642 7067996 Vimu10g00798 10 7066642 7067996 ECH