Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00776 ATGGCGAGAGAGCTTCTCGCACGCAATCTGGGTCAATGGATCTCTGTGTGTTTGCTGTTACTTTTTCATGTCAATTTCGGAACTTGTTTTTACCTTCCTGGTGTTGCACCCGAGGATTTCCACAAGGGGGATCTGTTGAGGGTGAAAGTGAACAAACTATCTTCAACAAAAACACAGCTTCCTTACTCCTACTATTCACTGCCTTATTGTCGTCCAGATCACATTGTTGACAGTGCAGAGAATCTTGGGGAAGTCCTTAGGGGTGACCGCATAGAAAACTCTCCTTACGTGTTCAAAATGAGAGAACCCCAGATGTGCAATGTTGTTTGTCGGCTAATTCTGGATAAAAAATCAGCCAACGAGTTCAAGGAAAAGATAGATGATGAATATCGAGTAAACATGATTTTAGACAATCTTCCTTTGGTTGTCCCACTGAGACGACCAGACCACGAATCATCCTTGGTTTATCTGCATGGCTTCCTCGTTGGCCTTAAAGGACAGTATGCAGGAAACAAGGATGAAAAGCATTTTGTCCACAACCATTTAACATTCATAGTTAAGTATCACAGAGATCCACTGACAGAGATGTCCAGGATAGTAGGCTTTGAGGTTAAGCCTTTCAGTGTAAAGCATGCATACGAAGGTGAGTGGGAAAATGACACGCGCTTAACTACATGTGATCCTCATGCAAAAAGGTTAGTCTCAGGCTCTGAGCCTCCTCAAGAGGTTGAAGACAAAAAAGAGATTATTTTTAGCTATGATGTTGAGTTCCAGGAAAGTAATTTGAAGTGGGCATCTCGCTGGGATTCCTATCTACTGATGGCCGATGATCAAATTCATTGGTTTTCAATTGTTAATTCTTTGATGATTGTACTTTTCCTATCGGGTATGGTGGCTATGATAATGTTGAGGACACTTTACAGAGACATCTCAAAGTACAATCAATTAGAGACACAGGAAGAAGCTCAGGAAGAGTCAGGGTGGAAGCTTGTTCATGGGGATGTTTTCAGGCCTCCTCCCAATTCAGATCTACTATGTGTATATGTTGGAACAGGTGTTCAATTTTTCGGAATGATTCTTGTCACAATGATCTTTGCGGCACTTGGATTCTTGTCTCCCTCAAACAGAGGAGGGTTGATGACTGCAATGCTCTTGCTTTGGGTGCTTATGGGACTGGGTGGTGGCTATTCTTCAGCTCGTCTTTATAAAATGTTCAAGGGACCACAATGGAAGAAAATTGCTCTCAAGACAGCTTTTATGTTTCCAGCCTCTGCTTTTTCAATTTTCTTTGTGTTAAACGCTCTAATCTGGGGCCAGAAATCTTCTGGGGCTGTCCCGTTTGGTACAATGTTTGCTCTTGTTTTCTTATGGTTTGGAATCTCAGTTCCATTGGTGTTTCTTGGTGGTCACTTTGGCTATAAAATGCCACTGGCTGAAGATCCTGTGAAGACAAACAAGATTGCTAGGCAGATCCCAGATCAGACATGGTACATGAATCCAACGTTTTCTGTTCTGATAGGAGGCGTGCTTCCATTTGGTGCTGTCTTCATTGAGCTTTTCTTCATTCTCACGTCAATCTGGTTACATCAGTTTTATTACATATTTGGTTTCCTGTTCATTGTGTTCATCATCCTCATTGTTACCTGTGCTGAGATTACAATAGTTCTCTGCTACTTCCAGCTGTGTAGTGAGGACTACCGTTGGTGGTGGAGGTCATATCTCACTTCTGGTTCCTCTGCACTCTACCTTTTCCTCTATGCTGCATTTTACTTTTTCACAAAGCTTGAGATCACAAAACCAGTATCTGGAGTCTTGTATTTTGGATACATGCTGCTTCTTTCCTATGGATTCTTCGTGCTCACTGGTACAATTGGTTTCTATTCATGCTTCTGGTTCATAAAACTAATCTACTCTTCAGTTAAAATTGACTGA 1932 0.4182 MARELLARNLGQWISVCLLLLFHVNFGTCFYLPGVAPEDFHKGDLLRVKVNKLSSTKTQLPYSYYSLPYCRPDHIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVVCRLILDKKSANEFKEKIDDEYRVNMILDNLPLVVPLRRPDHESSLVYLHGFLVGLKGQYAGNKDEKHFVHNHLTFIVKYHRDPLTEMSRIVGFEVKPFSVKHAYEGEWENDTRLTTCDPHAKRLVSGSEPPQEVEDKKEIIFSYDVEFQESNLKWASRWDSYLLMADDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQLETQEEAQEESGWKLVHGDVFRPPPNSDLLCVYVGTGVQFFGMILVTMIFAALGFLSPSNRGGLMTAMLLLWVLMGLGGGYSSARLYKMFKGPQWKKIALKTAFMFPASAFSIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFLGGHFGYKMPLAEDPVKTNKIARQIPDQTWYMNPTFSVLIGGVLPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIVTCAEITIVLCYFQLCSEDYRWWWRSYLTSGSSALYLFLYAAFYFFTKLEITKPVSGVLYFGYMLLLSYGFFVLTGTIGFYSCFWFIKLIYSSVKID 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00776 643 Pfam Endomembrane protein 70 61 599 IPR004240 GO:0016020
Vimu10g00776 643 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 29 643 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00776 Vimu-Chr10 6810360 6813756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00776 15 643 Miscellaneous Gene Families AT5G10840 78.730 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00776 K17086 - gmx:100804564 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00776 10 6810360 6813756 Vimu10g00776 10 6810360 6813756 ECH