Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00772 ATGGGGAACTTCGTCCCAAAGAAAGCTGGTACTCCAAAAAAGAATGAGATTGTGTTCACTGCACCAACAGGAGAGGAGATCAATAACAGGAAGCAGTTGGAAAAATATTTGAAGGCACACCCTGGTGGTCCAGCTGTATCAGAATTTGATTGGGGCACTGGTGAGACCCCAAGAAGATCTGCAAGAATCAGTGAGAAGGCGAAGGCAGCTCTTCCAACAGAAAGCGAAACCCCAAAGAAACGTAGTAAAAGAACACCAGCTTCGCAGAAAGAAACTTCCCAGGAGGAAAAAGAAGAGGACACAAAGGAAATGGAGATGCAAGCAGATGATGAAATCGCTAAGGTTGATGAAGATATAGAGAAGGAAAATAATGTGGTAACGGAAAATCAAGATGACAAGACTGCAGAGGATACAAATATCAACAAATCAACTAACCCTGGAGATGCTAAAGCTGGAGAAAACGTTGAGGCACGTAATGATGAGGAAAAATCCAATGCTGCTGATGGAGAATTACACGCATTGAAAGATGAAGTTGTTGACAAAGGAACTGAGGGTGCAGTGTCTCTGAGAAATGATGAAGAAAAGATTGGGCAACAACGGGAAGAGACAAAAGAATATCACAGGTCTGGGGAGCCCGAGAAATCTGAAACATGCAGTACTGCTGACAAAACAGTTGAAGTGGAAGGAGTGAATACAGAAGAATTCATCAAGAGTACTAGTAAACTTAAAGAAGTTGAAAAAATAGAAGGAACGAAAGTGAATAGTGAAGAACATGACAAGCTTGATGAGATAAATAAGAAGGTTGAAGCTGAGTTGACTGAGAATGGCAATCATGGGAGTTGA 843 0.4164 MGNFVPKKAGTPKKNEIVFTAPTGEEINNRKQLEKYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKAALPTESETPKKRSKRTPASQKETSQEEKEEDTKEMEMQADDEIAKVDEDIEKENNVVTENQDDKTAEDTNINKSTNPGDAKAGENVEARNDEEKSNAADGELHALKDEVVDKGTEGAVSLRNDEEKIGQQREETKEYHRSGEPEKSETCSTADKTVEVEGVNTEEFIKSTSKLKEVEKIEGTKVNSEEHDKLDEINKKVEAELTENGNHGS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00772 280 MobiDBLite consensus disorder prediction 72 101 - -
Vimu10g00772 280 Pfam Methyl-CpG binding domain 4 55 IPR001739 GO:0003677
Vimu10g00772 280 MobiDBLite consensus disorder prediction 153 221 - -
Vimu10g00772 280 MobiDBLite consensus disorder prediction 1 23 - -
Vimu10g00772 280 SUPERFAMILY DNA-binding domain 4 83 IPR016177 GO:0003677
Vimu10g00772 280 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 4 267 IPR039622 -
Vimu10g00772 280 Gene3D - 3 109 - -
Vimu10g00772 280 MobiDBLite consensus disorder prediction 102 116 - -
Vimu10g00772 280 MobiDBLite consensus disorder prediction 117 138 - -
Vimu10g00772 280 MobiDBLite consensus disorder prediction 38 223 - -
Vimu10g00772 280 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 56 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00772 Vimu-Chr10 6772941 6777280 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00772 - - gmx:100814375 376.326