Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00770 ATGCCCAGGCCAGGCCCAAGACCATACGAGTGCATGAGGAGAGCTTGGCACAGCGACCACCACCATCCCATCAGAGGTTCCGTCATTCGACGAATTTTCAGGGTCGCCGCTCAGTTTCACTCTCTGTCTACTAAGAACAACAAGGAGTGGCAGCAGAAGCTTCCCGTCGTTGTCCTCAGAGCCGAAGAAATCATCTACTCCAAAGCTAATTCCGAGGCAGAGTACCTTAACCCCGACACGCTCCTCCACCGCCTCAATGATGCCATCAACACTATCATTCGCAGAGAAGAAACCAACGAGACCGGCAAGCTTTTGCCACCATGTATCGAAGCTGCACTTAACCTTGGTTGCAAGCCAGTGAGAACATCAAGAAGTGATAGGCACAATAACTCCAGGACTTACCTTACATCGAGGAATCAACAATACCCTTTTTCTGTTTCTCCCGAATCTGTTGCTTCTAGCAATGCTTTAGCCTTTTTTCCAGTGTCGGATTCTAGCCACCAGACCAGCCTGAATAACTACTCTTTATTAAACAACTTTGCTGCTGTTCACCATCACCAACCCTTTCCAGTGCAAAGTAACCCCTCATTGAACTTCGGTTCCGTTTACCCATTGTGTTATGGTTTTGAACCCCAAGAGCCTCGACTGCGGATCAACAACCCGGGGAACACTTACTCTGATACAATCTTTGTTGGCACACCCGTCATTACTCCAGCCTTGGAGCCATCTAGAATGGATCCATTGCGGAACTTGTACTGTGGTGGAGTCCATTATCCTCCCAACAGAATTGTGAAAGAAACTGCTGTAAGTGTTGCGGAGGAGGAGTCGCGAGCCGGGGAATGTGATTTGTCTTTGAGGTTGGGTCTGTGTTTGCAGACTAACAAAACAAGTTCAGCATATGGCTTAGAAGATGGCAGGCTAAGAGTTTCTCAGGAGGCTAGTAAATTTGGCCATTCATCTCAACAGATCAATGAAGGTTACTGTTTTTACCCCAGAGGAACTAGTTATGGTACCATTTAG 1020 0.4755 MPRPGPRPYECMRRAWHSDHHHPIRGSVIRRIFRVAAQFHSLSTKNNKEWQQKLPVVVLRAEEIIYSKANSEAEYLNPDTLLHRLNDAINTIIRREETNETGKLLPPCIEAALNLGCKPVRTSRSDRHNNSRTYLTSRNQQYPFSVSPESVASSNALAFFPVSDSSHQTSLNNYSLLNNFAAVHHHQPFPVQSNPSLNFGSVYPLCYGFEPQEPRLRINNPGNTYSDTIFVGTPVITPALEPSRMDPLRNLYCGGVHYPPNRIVKETAVSVAEEESRAGECDLSLRLGLCLQTNKTSSAYGLEDGRLRVSQEASKFGHSSQQINEGYCFYPRGTSYGTI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00770 339 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 335 - -
Vimu10g00770 339 Gene3D Coactivator CBP, KIX domain 11 102 IPR036529 GO:0003712|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00770 Vimu-Chr10 6765678 6766964 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00770 - - vun:114195904 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00770 10 6765678 6766964 Vimu10g00770 10 6765678 6766964 ECH