Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00767 ATGGTTTTGGCATACGACCTTCTTAAGATGGATATTACAACTTGTTTACAGGTTGTGATGGAAGCAGTCAATAAGCCTCGAAATATTACATATAAAGGATCAACTGACTTGGTGACCGAGACTGATAAAATGAGTGAAGCTGCCATATTAGAAGTGGTGAAAAAGAATTTTGATGATCATCTTATTCTTGGGGAAGAAGGAGGAGTTATAGGAGATACGGCATCTGATTATCTCTGGTGCATTGATCCTTTAGACGGAACAACAAACTTTGCACATGGTTATCCGAGCTTTGCTGTCTCTGTTGGAGTTCTATATCGAGGGAATCCTGCTGCTGCCGCAGTGGTTGAGTTTGTAGGAGGTCCTATGTGTTGGAATACTCGCCTATTTTCTGCAACTGCAGGTGGTGGAGCATTTTGTAATGGCCAAAGGATTCAAGTGAGCGCAACTAATCAGGTGGAACAATCTCTTCTAGTGACAGGCTTTGGGTATGATCATGATGATGCATGGTCTACTAACATCGACTTATTCAAAGAATTTACAGATGTCAGCAGGGGTGTAAGACGGCTTGGTGCAGCTGCTGTGGACATGTGTCATGTAGCATTAGGAATTGTAGAAGCTTATTGGGAATATCGTCTAAAGCCATGGGATATGGCTGCTGGTGTTTTGATGGTTGAAGAAGCTGGTGGCACAGTTTCTCGGATGGATGGAGGAAAATTTTGTGTTTTTGATAGATCTGTTTTGGTTTCGAACGGCCTGCTCCATACAGAGGACATTGTCACGGGAGAGAGAAGGAAGAAGATGGACAACCCTAACACCGTAAGAGGGGGTATGGGAGCCATTAACCATAAAAATAAACTTATTACCAGGTATATGATCAATGGCACTAGAGTCAAGGACTCAGGAGCCAAGAGAAGCAGGAAAGGCAACCATCTACGGCATAACATCGGTCAATGGTGCAATAAAGTTTGTGACAATGATTGCACTGGGATGATCTCTATCGGGTTTGCACAAGCAGATGCAGTCATCATGCTAAGATACCATGACAGAGGAATCACCAGGAGGGACAGAATACAGTGGACCAAGTTGAGTTCAATGTGGGCACAGTTGGAGACCTCAAAATCTGATCACAAATTGATTGATTACCCATTGAAAAATCCATACAATGCCATCAACGTAAAGAAGGTGAGTGAAAACATGAGCGAAAAGTTCATTGAAGAGAATAGCATGAACCTTGCGCATGTTTTCAACCATGGGACTTTCAAGGCGTTGAGGGACAGTGATACTCAGAAGATTTTGGCGAACACCATTGAGGGGTTGAGTATTATTGGTGTATAG 1335 0.4292 MVLAYDLLKMDITTCLQVVMEAVNKPRNITYKGSTDLVTETDKMSEAAILEVVKKNFDDHLILGEEGGVIGDTASDYLWCIDPLDGTTNFAHGYPSFAVSVGVLYRGNPAAAAVVEFVGGPMCWNTRLFSATAGGGAFCNGQRIQVSATNQVEQSLLVTGFGYDHDDAWSTNIDLFKEFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLMVEEAGGTVSRMDGGKFCVFDRSVLVSNGLLHTEDIVTGERRKKMDNPNTVRGGMGAINHKNKLITRYMINGTRVKDSGAKRSRKGNHLRHNIGQWCNKVCDNDCTGMISIGFAQADAVIMLRYHDRGITRRDRIQWTKLSSMWAQLETSKSDHKLIDYPLKNPYNAINVKKVSENMSEKFIEENSMNLAHVFNHGTFKALRDSDTQKILANTIEGLSIIGV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00767 444 CDD IMPase 17 250 IPR033942 GO:0008934
Vimu10g00767 444 PRINTS Inositol monophosphatase superfamily signature 36 56 IPR000760 -
Vimu10g00767 444 PRINTS Inositol monophosphatase superfamily signature 79 95 IPR000760 -
Vimu10g00767 444 PRINTS Inositol monophosphatase superfamily signature 134 157 IPR000760 -
Vimu10g00767 444 PRINTS Inositol monophosphatase superfamily signature 58 74 IPR000760 -
Vimu10g00767 444 PRINTS Inositol monophosphatase superfamily signature 181 202 IPR000760 -
Vimu10g00767 444 PRINTS Inositol monophosphatase superfamily signature 212 236 IPR000760 -
Vimu10g00767 444 FunFam Inositol-1-monophosphatase 4 144 - -
Vimu10g00767 444 SUPERFAMILY Carbohydrate phosphatase 18 255 - -
Vimu10g00767 444 ProSitePatterns Inositol monophosphatase family signature 2. 215 229 IPR020550 GO:0046854
Vimu10g00767 444 ProSitePatterns Inositol monophosphatase family signature 1. 79 92 IPR020583 -
Vimu10g00767 444 Gene3D - 11 144 - -
Vimu10g00767 444 Gene3D - 145 263 - -
Vimu10g00767 444 PANTHER INOSITOL MONOPHOSPHATASE 16 256 - -
Vimu10g00767 444 FunFam Inositol-1-monophosphatase 145 268 - -
Vimu10g00767 444 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 136 154 IPR020552 GO:0046854
Vimu10g00767 444 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 15 34 IPR020552 GO:0046854
Vimu10g00767 444 Pfam Inositol monophosphatase family 15 255 IPR000760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00767 Vimu-Chr10 6735890 6751546 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00767 K01092 - gmx:100796770 476.863