Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00760 ATGGATTCATTATCGTCATCGTCATCGGCAATTGTGGAGTCCTTCCGGGGCTGTGGCATTTCGAGTAGCCCTCGCCTGTGTAAAGAGGAGCTGAGGCAAAAGTTGACGATGCCGCAATACCTTCGGTCGGCGATGCGCGATTCCATCAGGTACAACGACGAAGCTGCCGGGGATAGTCGTCGCGTTCGTAGCGACGATGACTCCAACGCAGTGGCACCGTTGGTGCCGATTGTGGTTTTCATCAACCCTCGCAGTGGTGGTCGCTGCGGCCCCTTACTCAAGGAGAGACTCCAATATCTCATCAGTGCAGAGCAGGTTTTAGACATCTTAGATGTGAAGCCTCATGAGTTTATCCGGTATGGGTTAGGTTGCCTGGAGATGTTGGCTGCTCTTGGTGATTCATGTGCTGAAGAAACTCGTGAAAGATTGAGGATTTTGGTAGCCGGAGGAGATGGTAGTGTTGGGTGGGTATTGGGATGTCTCTCAGAACTTCACGCACAAGGTCGGTTGCCGGTTCCTCCAGTAGGGATCATACCTCTTGGTACAGGCAATGACCTGTCTAGGAGTTTTGGTTGGGGTGGTTCCTTTCCTTTTTCATGGAAGGCAGCTATCAAGAGAAGTCTTCACAAGGCTTCTATTGCTCCACTTTGTCTTTTGGATAGTTGGCGATTTTCTATTTCAATGCCAGAAGGCACAGTGATAGAACCACCACATTGTCTGAAGCATACAACAGAGTACACATTTGATGAGGATTTAGAAATTGAGGGAGAATTGTCTGAGAATGTTATATATTACGAAGGCGTGTTCTACAATTACTTCAGTATAGGAATGGATGCCCAAGTGGCTTATGGTTTTCATAATTTACGAAATGAAAAACCTTACCTTGCACAAGGTCCAATTGCAAATAAGATTATATACTCCGGTTACTCATGTACTCAAGGATGGTTCTTCACACCATGCAGCAGTGATCCACGTTTAAGGGGACTAAAGAACATTTTGCGGATGCATGTCAAAAAGATCAATAGCTCAGAGTGGGAGCAGGTTCCCGTTCCTACAAGTGTAAGAGCCATAGTTGCTCTAAATCTTCATAGTTATGGAAGTGGTAGAAATCCATGGGGTAACCTCACACCTGAGTATTTAGAAAAGAGAGGTTTCGTAGAAGCAAAAGTTGATGATGGACTTCTAGAAATATTTGGTCTAAAACAAGGATGGCATGCATCATTTGTCATGGTTGAATTGATCTCTGCAAAGCATATAGCCCAGGTACCACACATTCTCTCATAA 1284 0.454 MDSLSSSSSAIVESFRGCGISSSPRLCKEELRQKLTMPQYLRSAMRDSIRYNDEAAGDSRRVRSDDDSNAVAPLVPIVVFINPRSGGRCGPLLKERLQYLISAEQVLDILDVKPHEFIRYGLGCLEMLAALGDSCAEETRERLRILVAGGDGSVGWVLGCLSELHAQGRLPVPPVGIIPLGTGNDLSRSFGWGGSFPFSWKAAIKRSLHKASIAPLCLLDSWRFSISMPEGTVIEPPHCLKHTTEYTFDEDLEIEGELSENVIYYEGVFYNYFSIGMDAQVAYGFHNLRNEKPYLAQGPIANKIIYSGYSCTQGWFFTPCSSDPRLRGLKNILRMHVKKINSSEWEQVPVPTSVRAIVALNLHSYGSGRNPWGNLTPEYLEKRGFVEAKVDDGLLEIFGLKQGWHASFVMVELISAKHIAQVPHILS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00760 427 PANTHER DIACYLGLYCEROL KINASE 25 425 IPR037607 GO:0004143|GO:0007165
Vimu10g00760 427 Pfam Diacylglycerol kinase catalytic domain 77 214 IPR001206 GO:0016301
Vimu10g00760 427 SMART dagk_c4b_2 268 427 IPR000756 GO:0004143|GO:0007205
Vimu10g00760 427 FunFam diacylglycerol kinase 74 220 - -
Vimu10g00760 427 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 75 412 IPR016064 -
Vimu10g00760 427 Pfam Diacylglycerol kinase accessory domain 268 423 IPR000756 GO:0004143|GO:0007205
Vimu10g00760 427 SMART dagk_c4a_7 76 222 IPR001206 GO:0016301
Vimu10g00760 427 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 72 227 IPR001206 GO:0016301
Vimu10g00760 427 FunFam diacylglycerol kinase 266 426 - -
Vimu10g00760 427 Gene3D - 76 216 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00760 Vimu-Chr10 6652515 6669141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00760 22 425 Acyl Lipid Metabolism Gene Families AT5G57690 70.297 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00760 K00901 - gmx:100811505 721.079