Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00748 ATGGCCCCTGAACAAATCACGCCGTCGGTGCCTGAGGAGAGAGGCGCCGGAGGCAAGCTCCGAAAACCAGCGCCGAGAAAGCCGCTTCCTAGCCCTTACGCACGTCCGCCGGAGGCCACGCGCCAACGTTGGATTTCGAAGCTCGTCGATCCTGCCTTGCGCCTAATCGCCGGCGGAGCCACTCGTCTTCTCCCTTCCATCTTCTCCGCCGCGACTCCTCCCTCTCCTATCCTTTGCCCTACCTCTGCGGCTGAAGATCAAGCTGTAACAAGGCAAGAACAGAACACACGAAGAAGTTGCAGGTACAAACTTAACTTCCAGCGTTTTCTTGCTGTAGTTGCTCTGATTTTGGCTGCAGTGTGTATCACAGCCGTCAACTGCCCTTGGAGGAGTGATATATGGAAAACTGGTGACAGTCATGAAGATGATTCGCACAGAAGTGATCTACATCTTTTGGCGTCCAAATCATCTGAAATTGCCAGTTCTTATGACATCAGTGGTAAACTGAAAAGCAGTTTAGATTTGGCTGTTTCCAGACAACATGAAAAAATAGAGAAATCTGATAAAGACGGGTTTTCTGATATTGAGCAGTTGGTCAAAGGGAAGAAATTCTCTAGAGATGAATTTGATCGTTTAGTGGCAGTGATAAATTCAAGGGTAATGGACCTTTCTAATGTTGAACAAGGTAAGGAAAATACAAGTTTGACTTCTAGCAAAGATGCTGAGCACGGGCCTCCAAATGTTTCAAATGAACAAAGGAATGAAGAGTCAGCTGGCGCTATATGGGGAACCTCAACACCTCTTGTGTCAAAAGTTCAGGATGAAATTGGTGCTTCACCAATAGAGATTGCTAGAGCTTATATGAATTCTCGTGTATCAGAGGCAGGTCCAAGTTCTAAGAACACGATTCATGTTGTTGAAAACACGGTGTTGCATGGTGTTGAAGGTGCAACAAAACCATATGATCCAGAACCATCAAAGAAGTCGTCAACATGTTGGCCAGGTGCTGTGGTGCAGGATGCTTACTTAACACCGCAAAGTCAGAGAAGATATGGACTTCATAATTTCCCCCGTACTCCTTATTCTAGAACTCTTTTGACAAAGTCCAAATCAAAGTTCATTCACATGCAAGGAGAAAACAACCACATTTCATCAACTCCCATCATTCAATCAAAGACTGCTATGTATCTACAGGATAAATCTAAAGCTGGATCATCAGAAAGTGGATATGGATCTGTTGGACCTATTCGTCGGACTAGGCATAGGGTTGGTGCACAATCTTCTTCAAGAAAACCGGTTTATTCATCTCTGAATGGCCTTTCGCACAGAGAAAGTTCTGGTGTTGATAGTTTCACTCCTGTTACCAAGAGTATAGAAACTGTTGGGACAGGATCCAGTCATAAGCCACCGGTCTTTCCAGTGGGTGTTCCAACAGTACACATGCATTCCAGTTTGATGGCTAAGAAAATATTAGACCATATTGATAGAAACATTCCAACACCTAAAGAGAAATTTGCTGAGCTGAAGCAGGCACCAAAATGGAGGAACTCTGAATCATCTACTGAGTTCAGTACTATCTTTTCAAATGAAGATAATGTCTTGCAAAAAATAAATGATTTTAGCCCTCAAAAATCTGATGGGCTTGAAGGAAAGAAATCTACTTTATTGATTGAAAGCCAGGGAAACTGCCACGCTCGTACTCAACTGAAGGATAGCACTGATAAATCTATGGAAGTTAGAAAAGAAGAAACTTTGGTGCCTGATGTGAATGCTTATAATAGCAGCAACACCAGACTTGGAAATGATGTAATGGTATCAGAACTGCTGATTTTGGGAGCTTTGGATGGTCAATGCGCTAGCTGGAATTGTGTCTTGGGTAGAAACCTTGGAGAATTGTTGCCACGAATAGAGGAACATAAACTAAATGTGGTAGGGTGTGAAAGGGTGACTGCTGAAAAGGAATCTTTGGAGATGCACCACAGAAGGGTTTTGGTGAATGCTGTGAAGCTGGAAAGGCTGGAGGAAGAGTTGGGGGCTCTTGAAGAAAGGTTGGAGTTTGATCCAAATCTGTTTGGTCCATTGTCAAATGGTTATCAAGTCATGAACGATGCTGATGTATCTGAAGAGGTGTTGGAGAAACATTCCGAATTGTCGCAGTCATATGATGGTGAAGCTAGGTTGACAGTGGATGCTACGAAAATGACTCTCCCAAGGGGAGGCCATCCATTTGGTGTAAATCAAGAAAAGCAGGCTCCCACTAACCCTGCCACCATTAAGCCAGTTTTACCTCCTATTGCTATTAAGAAGCCCGAATCAAGATGGACAGTAGCATCTGATAACGGCTCTGGATTTACCTTTCCTGTTTCAACTTCCTCTTCTGTATTCTCTGAGCCACCAACTCCATCCATCATGCCTTTGTTTTCTGCTGGGGATCAGCACCAATTAAAAGAAGGATCTACTGAGCTGTCTTATAGTTTTGGTTTGAAAAAGTGTCCGGCCATAGTTTTTTGCTTCCCTTCCACAAGCAATACTACTGTTCAGAATGAAGCCGGAGACCCCAAGTTTAACTTTGGCTCAACAAAGAAGACAAGTTTATCATTCAGCTTTGAAAACAAAGCTGTCCACTGCTAA 2631 0.4363 MAPEQITPSVPEERGAGGKLRKPAPRKPLPSPYARPPEATRQRWISKLVDPALRLIAGGATRLLPSIFSAATPPSPILCPTSAAEDQAVTRQEQNTRRSCRYKLNFQRFLAVVALILAAVCITAVNCPWRSDIWKTGDSHEDDSHRSDLHLLASKSSEIASSYDISGKLKSSLDLAVSRQHEKIEKSDKDGFSDIEQLVKGKKFSRDEFDRLVAVINSRVMDLSNVEQGKENTSLTSSKDAEHGPPNVSNEQRNEESAGAIWGTSTPLVSKVQDEIGASPIEIARAYMNSRVSEAGPSSKNTIHVVENTVLHGVEGATKPYDPEPSKKSSTCWPGAVVQDAYLTPQSQRRYGLHNFPRTPYSRTLLTKSKSKFIHMQGENNHISSTPIIQSKTAMYLQDKSKAGSSESGYGSVGPIRRTRHRVGAQSSSRKPVYSSLNGLSHRESSGVDSFTPVTKSIETVGTGSSHKPPVFPVGVPTVHMHSSLMAKKILDHIDRNIPTPKEKFAELKQAPKWRNSESSTEFSTIFSNEDNVLQKINDFSPQKSDGLEGKKSTLLIESQGNCHARTQLKDSTDKSMEVRKEETLVPDVNAYNSSNTRLGNDVMVSELLILGALDGQCASWNCVLGRNLGELLPRIEEHKLNVVGCERVTAEKESLEMHHRRVLVNAVKLERLEEELGALEERLEFDPNLFGPLSNGYQVMNDADVSEEVLEKHSELSQSYDGEARLTVDATKMTLPRGGHPFGVNQEKQAPTNPATIKPVLPPIAIKKPESRWTVASDNGSGFTFPVSTSSSVFSEPPTPSIMPLFSAGDQHQLKEGSTELSYSFGLKKCPAIVFCFPSTSNTTVQNEAGDPKFNFGSTKKTSLSFSFENKAVHC 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00748 876 MobiDBLite consensus disorder prediction 400 450 - -
Vimu10g00748 876 MobiDBLite consensus disorder prediction 426 450 - -
Vimu10g00748 876 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP1 11 868 - -
Vimu10g00748 876 MobiDBLite consensus disorder prediction 226 261 - -
Vimu10g00748 876 MobiDBLite consensus disorder prediction 1 38 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00748 - - gmx:100789027 755.747