Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00746 ATGTGGATGTACGGAGAATCTCCGGTTTCAGGGAATGATTCATTGCACTACACCAATTTTTCATCGTTTTTGCCCTGCGCTGTGGGGTTGCTGCTCTCAAATGCTCTTGATCCTTATCTTGCTCAGTATTCTTCTTCTCCCATTCCTATTCCTGTGCCTGTGGATTTGCCTTCCCTACTCATCATGCCTACCCTTGTCAATTATAGTGGTGATGATGAACTCTATTCTGGAGCTTCCTTTTATCAAAAAAATCTCATTGATTTGGGTCGCGTGTGTACTTTGGGTTCAAGTGTGGATGGGTACTACTGCAGTCCTAGGAAACGAGCTCGCATCAGTGCCCCGGATATTTTTGAAACTCCACGGCTCAGGAAAGATCAAAAGCCTACGATTGAAGTTCTTCCTAATGAATGTCTTTTTGAGATTTTCAGACGGCTCTCTAGTGGCAAAGAGAGGAGCTCTTGTTCCTGTGTATCTAAGCGGTGGCTCATGCTTATGAGCAGTATCTGCAGAGCTGAAATTTACAAGTCTGAGAATCTGACTGAGGGATCTGCTTCCTGTGATGATGAAATGGCCTCGGTGGATGAGGATCTAGTTATCGAAGATGATGGGTACTTATCGCGGTGTTTGGAAGGAAAGAAGGCAACTGATGTGAGACTTGCAGCAATTGCAGTTGGGACTAGTGCCCGTGGAGGACTGGGAAAACTGTCTATCAGAGGAAGCAATTCTGCTCGCGGTGTCACAGATGTTGGTCTCTCAGCAATTGCTCATGGCTGCCCTTCTCTTAGATCATTTTCTTTGTGGAATGTTTCTTCTGTCGGGGATGAGGGTCTGTCCGAAATAGCAAAAGGGTGCCATATGTTGGAGAAGCTTGATATCTGCCAGGCTTCCTCCATTAGCAACAAAAGTCTAATTGCAATAGCTAAGGGCTGCCCCAATTTGACCACCTTAAACATTGAATCGTGTCCTGAGGTTGGAAACGAGGGGTTGCAAGCTATAGCAAGGTCTTGCCCCAAGTTAAAGTGCATCTCTATCAAGGATTGTCCTCTTGTTGGGGATCATGGAGTATCAAGTCTATTATCATCAGCTGATAACCTTTCAAGGGTCAAGCTTCAGGATTTAAACATTACAGATTTCTCTCTGGCTGTCATTGGTCATTATGGAAAGGCAATTGTAAATTTAGTGCTCTCCAGTCTTCAAAATGTCAGTGAAAGGGGGTTTTGGGTCATGGGTGTTGCTCAAGGTCTGCAGAAGCTTATGTCACTTACAGTTTCCTCATGTCGAGGGATAACAGATGCAAGCATCGAAGCCATAGGTAAAGGTTGCATCCACCTGAAGCAGATGTTTCTGCGCAGGTGTTGTTTAGTGTCTGATAATGGCTTGGTAGCATTTAGCAAAGCTGCAAGGTCTCTCGAGAGCCTGCAGTTGGAGGAGTGCAACAGCATCACCCAGTTTGGGATTATTGGTGCTCTTTCAAACATCAAAACAACATTGAAGTATCTCACCCTTCTAAAGTGTAAAGGAATTAAAGATATAGATGTGGAAGCATCAATGTTTTCTCCCTGTGAGTCTCTCCAACATTTATCCATTCGTAATTGCCCTGGTGTTGGAAATGCTAGCCTCACTATGGTTGGGAAATTGTGTCCCAAACTTCAGCGCGTTGATCTGACTGGACTTTATGGTGTTACTGATGCTGGCCTTCTTCCTCTTGTACAGAATTCTGAGGCTGGGTTGGTCAAGGTGAACCTTGCTGGCTGCGGCAATTTGTCAGACAACATAGTTTCAGAACTGGCCAGGCTACACGGTGGAACACTTGAATTGCTAAATCTTGATGGATGCAGGAAGATTACCGATGCAAGCTTGGTTGCAATTGCAGATAACTGCCTTCTGCTTAAGGATCTAGACATGTCAAAGTGTGCAATCACTGATGCTGGAATAGCTGTTCTTTCTAATGCCAATCGCCTTACTCTGCAAGTGCTTTCTTTGTCAAACTGTTCTGGTATAACTTGCAAGAGTGGACCTTCCCTAACAAATTTAGGCCAGACCTTGGTTGGGTTGAATCTTCAGAATTGCAATTCAATTGGCTGCAACACAGTTGAGTTGCTAGTGGAGAAGTTCATTTTCCGTGCAGAAATGCTTGTTACAACCCTTTTGGCCTTGCTACTAGAGGCCACTTCCTTTATGCTATGGTTCCCTGAGAATGCGTTTACTATGTCTTGGTTGGTTGATGGCTGCCACTGGAAATAG 2244 0.4465 MWMYGESPVSGNDSLHYTNFSSFLPCAVGLLLSNALDPYLAQYSSSPIPIPVPVDLPSLLIMPTLVNYSGDDELYSGASFYQKNLIDLGRVCTLGSSVDGYYCSPRKRARISAPDIFETPRLRKDQKPTIEVLPNECLFEIFRRLSSGKERSSCSCVSKRWLMLMSSICRAEIYKSENLTEGSASCDDEMASVDEDLVIEDDGYLSRCLEGKKATDVRLAAIAVGTSARGGLGKLSIRGSNSARGVTDVGLSAIAHGCPSLRSFSLWNVSSVGDEGLSEIAKGCHMLEKLDICQASSISNKSLIAIAKGCPNLTTLNIESCPEVGNEGLQAIARSCPKLKCISIKDCPLVGDHGVSSLLSSADNLSRVKLQDLNITDFSLAVIGHYGKAIVNLVLSSLQNVSERGFWVMGVAQGLQKLMSLTVSSCRGITDASIEAIGKGCIHLKQMFLRRCCLVSDNGLVAFSKAARSLESLQLEECNSITQFGIIGALSNIKTTLKYLTLLKCKGIKDIDVEASMFSPCESLQHLSIRNCPGVGNASLTMVGKLCPKLQRVDLTGLYGVTDAGLLPLVQNSEAGLVKVNLAGCGNLSDNIVSELARLHGGTLELLNLDGCRKITDASLVAIADNCLLLKDLDMSKCAITDAGIAVLSNANRLTLQVLSLSNCSGITCKSGPSLTNLGQTLVGLNLQNCNSIGCNTVELLVEKFIFRAEMLVTTLLALLLEATSFMLWFPENAFTMSWLVDGCHWK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00746 747 FunFam EIN3-binding F-box protein 1 204 322 - -
Vimu10g00746 747 Gene3D Ribonuclease Inhibitor 516 574 IPR032675 -
Vimu10g00746 747 SUPERFAMILY RNI-like 244 486 - -
Vimu10g00746 747 SMART fbox_2 133 173 IPR001810 GO:0005515
Vimu10g00746 747 SUPERFAMILY F-box domain 125 169 IPR036047 GO:0005515
Vimu10g00746 747 Gene3D - 130 170 - -
Vimu10g00746 747 Pfam F-box-like 131 162 IPR001810 GO:0005515
Vimu10g00746 747 PANTHER UNCHARACTERIZED 366 510 - -
Vimu10g00746 747 FunFam EIN3-binding F-box protein 1 323 512 - -
Vimu10g00746 747 Gene3D Ribonuclease Inhibitor 575 719 IPR032675 -
Vimu10g00746 747 FunFam EIN3-binding F-box protein 1 129 166 - -
Vimu10g00746 747 FunFam EIN3-binding F-box protein 1 572 710 - -
Vimu10g00746 747 CDD F-box_AtTIR1-like 130 164 - -
Vimu10g00746 747 Gene3D Ribonuclease Inhibitor 409 515 IPR032675 -
Vimu10g00746 747 Gene3D Ribonuclease Inhibitor 206 408 IPR032675 -
Vimu10g00746 747 SMART LRR_CC_2 627 651 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 467 492 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 653 681 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 601 626 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 441 466 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 415 440 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 574 599 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 494 519 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 284 309 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 336 361 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 547 572 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 521 546 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 310 335 IPR006553 -
Vimu10g00746 747 SMART LRR_CC_2 258 283 IPR006553 -
Vimu10g00746 747 SUPERFAMILY RNI-like 412 668 - -
Vimu10g00746 747 Pfam Leucine Rich repeat 310 333 IPR001611 GO:0005515
Vimu10g00746 747 Pfam Leucine Rich repeat 627 648 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00746 Vimu-Chr10 6491387 6494109 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00746 K14515 - gmx:100792339 1066.22