Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00742 ATGTCTTCATCAAATATCCCTCATGTGGTACTTCAATCTTCTTCGAACCATCACAAGATGCCTGTGATTGGATTTGGCACTGCTTCAACATCTTCCCCCATTGACACCAAAGAAGCAATACTAGAAGCTATCAAATTAGGTTACAGACACTTTGATACTGCTTCAATATATGACTCTGAAAAATCCCTTGGAGAAGCCATAGCTGAAGCACTTCAACTTGGCTTCATAGCCTCCAGAGACGAACTCTTCATCACTTCCAAACTCTGGTGTACTGATAACTTTCCTAATCTTGTTCTTCCAGCCATCCACAAAACGCTTCAGTGTCTGAAGTTGGAATATTTGGATCTTTACTTAATTCACTGGCCCATTTCTTTGAATACTGCAACTTTCGATTTTCCTTTTCCCGAAGAGACCCTAGCATCATTTGATTTAAAGGGCGTGTGGCAAGCAATGGAGGAGTGCCAAAAACAAGGCCTTACAAAATTCATTGGAGTCAGCAATTTCAGTTGTCATAAACTTGAAAATCTCCTTTCTTTTGCTACTATTCCTCCTTCTGTCAATCAAGTTGAGTTGAATCCTACTTGGCAGCAAAAAAAGTTGAGAGAATTTTGTCAAAAAGAAAATATAATTGTAACTGCTCACAGTCCTTTGGGATCAGGAAACTTCTGGGGTTTCAATAATGTAATGGACAATGGATTGCTCAAACAAATTGGAGAAGCTCATGACAAGTCTATTGCTCAGGTATCTCTTAGATGGTTGTATGAGGTAGGGACAACTATCGTGGTTAAGAGCTACAACAAGGAGAGAATGAAACAAAATTTGGAAATATTTGATTGGTCATTAACAAAAGATGACTACGCAAAAATTGATGAAATCAAGCAAAATAGGATATGCAACCTTGGACCAGAAATTTGGGATGAAGAAAAATAA 930 0.3817 MSSSNIPHVVLQSSSNHHKMPVIGFGTASTSSPIDTKEAILEAIKLGYRHFDTASIYDSEKSLGEAIAEALQLGFIASRDELFITSKLWCTDNFPNLVLPAIHKTLQCLKLEYLDLYLIHWPISLNTATFDFPFPEETLASFDLKGVWQAMEECQKQGLTKFIGVSNFSCHKLENLLSFATIPPSVNQVELNPTWQQKKLREFCQKENIIVTAHSPLGSGNFWGFNNVMDNGLLKQIGEAHDKSIAQVSLRWLYEVGTTIVVKSYNKERMKQNLEIFDWSLTKDDYAKIDEIKQNRICNLGPEIWDEEK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00742 309 ProSitePatterns Aldo/keto reductase family signature 2. 151 168 IPR018170 GO:0016491
Vimu10g00742 309 PIRSF AKR 5 308 IPR020471 GO:0016491
Vimu10g00742 309 CDD AKR_AKR4A_4B 16 294 IPR044497 GO:0016616
Vimu10g00742 309 ProSitePatterns Aldo/keto reductase family signature 1. 47 64 IPR018170 GO:0016491
Vimu10g00742 309 ProSitePatterns Aldo/keto reductase family putative active site signature. 261 276 IPR018170 GO:0016491
Vimu10g00742 309 PANTHER ALDO/KETO REDUCTASE 15 294 - -
Vimu10g00742 309 Gene3D - 2 303 IPR036812 -
Vimu10g00742 309 PRINTS Aldo-keto reductase signature 185 214 IPR020471 GO:0016491
Vimu10g00742 309 PRINTS Aldo-keto reductase signature 228 252 IPR020471 GO:0016491
Vimu10g00742 309 PRINTS Aldo-keto reductase signature 151 168 IPR020471 GO:0016491
Vimu10g00742 309 PRINTS Aldo-keto reductase signature 43 67 IPR020471 GO:0016491
Vimu10g00742 309 PRINTS Aldo-keto reductase signature 104 122 IPR020471 GO:0016491
Vimu10g00742 309 FunFam NAD(P)-linked oxidoreductase superfamily protein 10 307 - -
Vimu10g00742 309 SUPERFAMILY NAD(P)-linked oxidoreductase 15 295 IPR036812 -
Vimu10g00742 309 Pfam Aldo/keto reductase family 23 293 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00742 Vimu-Chr10 6434307 6436442 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00742 K08243 K22374 gmx:100788544 483.796