Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00740 ATGATCGGATTTGGCACTGCTTCACCTTCCATTGCTGGCACCAAAGAGGCATTGTTAGAAGCTATCAAAGTAGGTTACAGACACTTTGACACTGCAAAAATATATGGTTCTGAAAAACCCCTTGGAGAAGCCATAACTGAGGCACTTAAACTTGGCCTCATAGCCTCCAGAGACGAACTCTTCATCACTTCTAAACTCTGGTGCACTGATAATTTTCCTCATCTTGTTCTTCCTGCTATCCACAAAACACTTCAGTCTTTGAACTTGAAATATCTGGATCTGTATTTGGTTCAATGGCCCGTTGCTATGAAGCATGGAGATTGGGATTACCCTTTTCCTGAAGAGGCAATAACATCATTTGACTTAAAGGGCGTGTGGCAAGCAATGGAGGAGTGCCAAAAGCAAGGCCTTACAAAATTCATTGGAGTCAGCAATTTCAATTGTCATAAACTTGAAAACCTCCTCTCTTTTGCTACTATTCCTCCTTCTGTCAATCAAGTTGAGTTGAATCCTACTTGGCAACAAAAGAAGTTGAGAGAATTATGCGAAAAAGAGGGTATAATTGTAACTGCGTGTAGTCCTTTGGGATCCGTAGGAAGCTTTTGGGGTTCTAACAAAGTAATGGAGAATGAATTGCTCAAGCAAATTGGAGAAGCTCATGGCAAATCTGTTGCTCAGGTATCTCTTAGATGGTTGTATGAGTTGGGGGTAACTATTGTGGTTAAGAGCTACAACAAAGAGAGAATGAAGCAAAATCTGGAAATATTTGATTGGTCATTAACAAAAGACGACTATGAAAAAATTGATGAAATCAAGCAGACTAAAACATTCAACCTTGGACCAAAAATTTGGAATGAAGAAGATTAA 867 0.3945 MIGFGTASPSIAGTKEALLEAIKVGYRHFDTAKIYGSEKPLGEAITEALKLGLIASRDELFITSKLWCTDNFPHLVLPAIHKTLQSLNLKYLDLYLVQWPVAMKHGDWDYPFPEEAITSFDLKGVWQAMEECQKQGLTKFIGVSNFNCHKLENLLSFATIPPSVNQVELNPTWQQKKLRELCEKEGIIVTACSPLGSVGSFWGSNKVMENELLKQIGEAHGKSVAQVSLRWLYELGVTIVVKSYNKERMKQNLEIFDWSLTKDDYEKIDEIKQTKTFNLGPKIWNEED 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00740 288 ProSitePatterns Aldo/keto reductase family signature 2. 129 146 IPR018170 GO:0016491
Vimu10g00740 288 FunFam NADPH-dependent codeinone reductase 1-1 1 286 - -
Vimu10g00740 288 ProSitePatterns Aldo/keto reductase family putative active site signature. 240 255 IPR018170 GO:0016491
Vimu10g00740 288 ProSitePatterns Aldo/keto reductase family signature 1. 25 42 IPR018170 GO:0016491
Vimu10g00740 288 PIRSF AKR 1 288 IPR020471 GO:0016491
Vimu10g00740 288 SUPERFAMILY NAD(P)-linked oxidoreductase 2 275 IPR036812 -
Vimu10g00740 288 PANTHER ALDO/KETO REDUCTASE 1 273 - -
Vimu10g00740 288 Gene3D - 1 283 IPR036812 -
Vimu10g00740 288 CDD AKR_AKR4A_4B 2 273 IPR044497 GO:0016616
Vimu10g00740 288 Pfam Aldo/keto reductase family 4 272 IPR023210 -
Vimu10g00740 288 PRINTS Aldo-keto reductase signature 129 146 IPR020471 GO:0016491
Vimu10g00740 288 PRINTS Aldo-keto reductase signature 207 231 IPR020471 GO:0016491
Vimu10g00740 288 PRINTS Aldo-keto reductase signature 163 192 IPR020471 GO:0016491
Vimu10g00740 288 PRINTS Aldo-keto reductase signature 82 100 IPR020471 GO:0016491
Vimu10g00740 288 PRINTS Aldo-keto reductase signature 21 45 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00740 Vimu-Chr10 6421806 6424092 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00740 K08243 K22374 gmx:100788544 452.21