Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00736 ATGAAGAACCTCAACGTGTGGCCGAACCCTAGTGGCGGGATTTCCCCGTGCCGTTCGACGTCTCCAACACTCAGCCTTGTCCGTTTTGTTCCTCCTTCTCCTTCTTTAGTTCGGTGTCATAGTTCTCTAACTCACCACACTTTCAGGTGTGCAGTGCTCGGTGCAGGATTCGCTGGCCTCTCTGTTGTTTGGCATTTGTTGAAGCAAAGTCCTAAAGAGTTGAATCTGAGAGTTGATATATACGATGAAGTGGGCATTGGGGGTGGTGCTTCTGGAATTTCCGGAGGTCTTCTTCACCCTTATTCCCCGAAAGTTAAGCTTCTCTGGGAGGGTGCACAGTGTTGGAAAGAGAGCATGGAGCTTTTGAGAGTTGCTGAAGAAGCTAGTGTCTCCAAAGATTACAGAAGTGCAGAATCTACTGAAAATATGGAAGCTTTTGTAGCTCACAAAAGGGGCATCTTAAGACCGGCAACAGATATGAAGAACATGATCAAATTGAATGATAACGTCAAGACTTGTCTTCCTAGCTGCAGAGTACAAACGCTTAACAATGGAGAGGCTCAAAGCCTTTTACCTGGTGTATATTTACCATTCAACACAGCTTTCTATATGCCTGAAGCTCTAAATATCAATTCTGGCCACTATCTTCAGGCACTTTTCCGAGGATGTGAAATTTTGGTGAAAGAATCATCAAGGGAATATGATGCAGTCATCGTATGCCTTGGCGCCAAGGTGAACATGCTTCCTGAGCTTTCTGGGAGGCTTCCTTTGAGGACATGTAGGGGTGTCATTGCACAACTGGAATTGCATGATGATATGAAAGGTTATCCCGAGAGGGCCCCCTCAATTTTATCAGATGCGTGGATTGCCGTTCAGGGGCCTCATAGTCTGAATTTGGGCTCAACTTGGGAATGGAAATCGGTAAATTCATCACCAAATGTTTCGAGCGATGAAGCTTCGAAAGCTCTTGAGGAGCTTTTGCCAAAGGCATCTACCATTTATCCTGGAATAAGGGATTGGGTTTTCACTGGAGCAAGAGCTGGTCTGAGGGCAATGCCTCCACTCACCACCCTTGGATCACTTCCACTTTTGGGTTGTATTAATGATATAATAGGCAGAAATCACACATGTAAGTATTGGTTATTTGGAGGGCTAGGTTCAAGAGGATTGCTATACCATGCTTGGCTAGGTAATTTGATGGCACAAGCTGTGCTTTCCTTTAATGAGGAAGTAATTCCATCTGAGTTGAGATCTTGGAAAGGCATTGAACCAAAATGTAGCGTTCTGCTCTAA 1293 0.4493 MKNLNVWPNPSGGISPCRSTSPTLSLVRFVPPSPSLVRCHSSLTHHTFRCAVLGAGFAGLSVVWHLLKQSPKELNLRVDIYDEVGIGGGASGISGGLLHPYSPKVKLLWEGAQCWKESMELLRVAEEASVSKDYRSAESTENMEAFVAHKRGILRPATDMKNMIKLNDNVKTCLPSCRVQTLNNGEAQSLLPGVYLPFNTAFYMPEALNINSGHYLQALFRGCEILVKESSREYDAVIVCLGAKVNMLPELSGRLPLRTCRGVIAQLELHDDMKGYPERAPSILSDAWIAVQGPHSLNLGSTWEWKSVNSSPNVSSDEASKALEELLPKASTIYPGIRDWVFTGARAGLRAMPPLTTLGSLPLLGCINDIIGRNHTCKYWLFGGLGSRGLLYHAWLGNLMAQAVLSFNEEVIPSELRSWKGIEPKCSVLL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00736 430 Pfam FAD dependent oxidoreductase 51 402 IPR006076 GO:0016491
Vimu10g00736 430 SUPERFAMILY Nucleotide-binding domain 45 407 - -
Vimu10g00736 430 PANTHER SARCOSINE DEHYDROGENASE-RELATED 47 417 - -
Vimu10g00736 430 Gene3D - 150 206 - -
Vimu10g00736 430 Gene3D - 257 357 - -
Vimu10g00736 430 Gene3D - 231 405 IPR036188 -
Vimu10g00736 430 Gene3D - 51 223 IPR036188 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00736 - - vra:106759991 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00736 10 6401276 6404507 Vimu10g00736 10 6401276 6404507 ECH