Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00724 ATGATAAACACCGCACCCAGCTGCTCCTTCCACCGCACCACCACTCTCACAACCTCTCACTCTCTTCCATTCACTCCCCTTCACCATTCATGTCTACACCACTGCCACTTCTCCTTCTGCACACAACCTCTCCGATTAAGCAACCTCCGCTGCCACACACTATCGCCGTTAACCACCAAGACGCTCAAAGTGAATTGCTCCATCAGCGATCCTCTGAAGGTGATGATATCAGGTGCACCTGCTTCCGGCAAAGGCACGCAATGTGAATTAATTTTCCAAAGGTTTGGATTGGTGCACATATCAACAGGGGATTTGCTAAGAGCAGAAGTGGCAGCTGGAACTGAAATTGGAAATAAAGCAAAGGAGTTCATGAACGCGGGCCAACTGGTTCCTGATGAAATTGTGACAGCAATGGTGGCAGCACGATTGTCTCTCGAAGATGCTAAGCAAAAAGGGTGGCTTCTTGATGGGTACCCTCGAAGTTTGGGCCAGGCCCAGAGTCTGGAGAAAATGCAGATACGACCTGATGTGTATATAGTATTGGATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGTAGAAGGCTTGATCCAGTGACAGGGAAGATATACCATCTAACTTTTTTTCCACCGGAGACTGAAGAGATTAAAGCAAGGCTGGTAACTCGACCTGACGACACTGAGGAGAAGGTCAAATCTCGCCTCAACATATACAAGCAAAATGCAGAAGCCGTATCTTCCTCGTACTCAAATATAATTCATAAGATTGATGGCAGCAATTCAAAAGAAGCGGTTTTCAAAGAAATTGAATCTTTGCTATCTCAATTGCAACATAATAAAGTAAAGCTAGTGAAATCTGGAGAAAAATCAATTCTTGATACAAAGAAAGGACGGACATCTTTGAGCCAGGATAAGTGGAGAGGGATTCCTACTAGACTAAACAATATTCCCCATTCTAGAGAAATCAGGAAATATTTCTATGATGATGTGCTACAAGCTACTGAGAGGGCTATCAATGATGGTAAAACTAGGTTGAAGGGATTCAAGGATGAATCCGAAGTGATGCAAAGTGAGTTGAGAGAAGAATGTTATTCAACTAGAATATCATACCAGCTCACCTCCGAGTTGTCTATTTCTTAA 1143 0.4357 MINTAPSCSFHRTTTLTTSHSLPFTPLHHSCLHHCHFSFCTQPLRLSNLRCHTLSPLTTKTLKVNCSISDPLKVMISGAPASGKGTQCELIFQRFGLVHISTGDLLRAEVAAGTEIGNKAKEFMNAGQLVPDEIVTAMVAARLSLEDAKQKGWLLDGYPRSLGQAQSLEKMQIRPDVYIVLDVPDEILIDRCVGRRLDPVTGKIYHLTFFPPETEEIKARLVTRPDDTEEKVKSRLNIYKQNAEAVSSSYSNIIHKIDGSNSKEAVFKEIESLLSQLQHNKVKLVKSGEKSILDTKKGRTSLSQDKWRGIPTRLNNIPHSREIRKYFYDDVLQATERAINDGKTRLKGFKDESEVMQSELREECYSTRISYQLTSELSIS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00724 380 Gene3D - 67 287 IPR027417 -
Vimu10g00724 380 CDD ADK 73 266 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu10g00724 380 PRINTS Adenylate kinase signature 103 117 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu10g00724 380 PRINTS Adenylate kinase signature 75 88 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu10g00724 380 PRINTS Adenylate kinase signature 153 169 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu10g00724 380 PRINTS Adenylate kinase signature 224 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu10g00724 380 PANTHER NUCLEOTIDE KINASE 54 272 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu10g00724 380 FunFam Adenylate kinase, chloroplastic 68 279 - -
Vimu10g00724 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 276 IPR027417 -
Vimu10g00724 380 ProSitePatterns Adenylate kinase signature. 153 164 IPR033690 -
Vimu10g00724 380 Pfam Adenylate kinase 76 252 - -
Vimu10g00724 380 NCBIfam adenylate kinase 73 274 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vimu10g00724 380 Hamap Adenylate kinase [adk]. 72 275 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00724 Vimu-Chr10 6267551 6272119 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00724 K00939 - gmx:100818830 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00724 10 6267551 6272119 Vimu10g00724 10 6267551 6272119 ECH