Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00710 ATGCAATCCGAGAGTTTGAGCCAGACTCCAGCTCTGACACTCTTTCCTGGCCTGAAACCCCCTCACAAAACCCTACTATTCCACAAAATATGTGTTCTTGTCATCACATTCCTTGCATATGCTTCCTTCCATGCCTCAAGGAAGCCCCCCAGCATTGTCAAGAGTGTTCTGGGACCCACAGTGCCATCGAATGCAGCTCAAGTTTCCAACTTGAGCTCCTATGATACTGGGTGGCCACCTTTCAATGGAACCCAAGGTACTCACAGGCTGGGCGAGCTTGATCTTGCATTCCTTACTTCTTACTCCATTGGCATGTATTTCGCTGGTCACGTTGGGGATCGGATTGATTTGAGGCTGTTTCTTGTATTTGGGATGATGGGCAGTGGCTTTTTTACCATACTTTTTGGGTTAGGTTATTGGTTAGATGTTCATGTGTTGGGGTTTTTTGTTGGTGTTCAGATTGTTTGTGGAGTGTTTCAGTCAATTGGATGGCCTTGTGTGGTTGCAGTTGTGGGGAATTGGTTAGGGGAATCAAAGAGGGGCTTGATAATGGGGGTATGGAATTCGCATACCTCGGTGGGGAATATCATTGGTTCAGTGGTGGCTTCAGGGGTTTTGGAGTTTGGCTGGGGTTGGTCCTTTGTGGTGCCTGGACTCCTTATAATTTTGGTGGGGATTTTGGTGTTTTTGTTTCTTGTCGTGAACCCCGAGAGTATGGGATTTGTGCATCCTGGAATGGACATCGAAATGAGTGTTGACACCAGAAATGTAGAGAATCTGCAGAAAGGGGAATCGGAGGAAACTAAGCTTATTGAGTCTGATAATTCAGATTCTTCTTCTGCAATTGGGTTTTTGGAGGCATGGAAGTTGCCAGGAGTGGCTCCGTTTGCTTTCTGTCTCTTTTTCTCCAAGCTAGTGGCTTATACCTTTCTGTATTGGTTGCCCTACTACATAAAGCACACTGCTGTTGCCGGTGTGCATATCTCACACAAAACTGCTGGGTTGCTATCAACGATATTTGACATTGGGGGAGTCCTAGGAGGAATAACAGCTGGTTTCGTTTCTGACTTGATTGAAGCACGTGCTATTACTGCAATTCTATTCCTGTTTCTATCAATTCCAGCACTTGCTTCGTATCGCATATTTGGGAGCCTCTCCATGTTGATGAACATCAGTTTAATGTTTCTTTCGGGGTTTTTGGTGAATGGTCCATATTCGCTCATCACAACTGCAGTGGCTGCTGATCTTGGTACGCAAAGCTTGAATGATCGGAATTCCCGAGCACTGGCGACTGTTACTGCAATTATAGATGGCACCGGTTCTGTTGGCGCTGCCCTTGGGCCACTTTTGGCTGGATATATTTCGACTAGGGGATGGAACAGTGTCTTTTTTATGCTCATTCTGTCTATTTTCTTTGCTGGTTTATTCTTGATTCGTATTGCAAGAACTGAGATAAGAGAGAAGCTTTCAGGAAAGTGA 1479 0.4537 MQSESLSQTPALTLFPGLKPPHKTLLFHKICVLVITFLAYASFHASRKPPSIVKSVLGPTVPSNAAQVSNLSSYDTGWPPFNGTQGTHRLGELDLAFLTSYSIGMYFAGHVGDRIDLRLFLVFGMMGSGFFTILFGLGYWLDVHVLGFFVGVQIVCGVFQSIGWPCVVAVVGNWLGESKRGLIMGVWNSHTSVGNIIGSVVASGVLEFGWGWSFVVPGLLIILVGILVFLFLVVNPESMGFVHPGMDIEMSVDTRNVENLQKGESEETKLIESDNSDSSSAIGFLEAWKLPGVAPFAFCLFFSKLVAYTFLYWLPYYIKHTAVAGVHISHKTAGLLSTIFDIGGVLGGITAGFVSDLIEARAITAILFLFLSIPALASYRIFGSLSMLMNISLMFLSGFLVNGPYSLITTAVAADLGTQSLNDRNSRALATVTAIIDGTGSVGAALGPLLAGYISTRGWNSVFFMLILSIFFAGLFLIRIARTEIREKLSGK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00710 492 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 486 IPR020846 GO:0022857
Vimu10g00710 492 SUPERFAMILY MFS general substrate transporter 28 485 IPR036259 -
Vimu10g00710 492 Gene3D MFS general substrate transporter like domains 288 490 IPR036259 -
Vimu10g00710 492 Gene3D MFS general substrate transporter like domains 25 244 IPR036259 -
Vimu10g00710 492 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 26 487 - -
Vimu10g00710 492 PIRSF Hexose_phosphate_transp 20 491 IPR000849 GO:0016020|GO:0022857|GO:0055085
Vimu10g00710 492 Pfam Major Facilitator Superfamily 55 416 IPR011701 GO:0022857|GO:0055085
Vimu10g00710 492 FunFam Sugar phosphate exchanger 3 isoform 1 23 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00710 Vimu-Chr10 6147456 6149503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00710 1 492 Organic Solute Cotransporters AT2G13100 71.862 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00710 K13783 - gmx:100813689 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00710 10 6147456 6149503 Vimu10g00710 10 6147456 6149503 ECH