Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00707 ATGCCTGCACCTCCACAGTTTGGACAGCAGCAGCCCCACCTCCCTTCCCTTGGAAAGTTTCGAGCCCCACCTCCCCTTCGAAAGTTTCAAAGCAGCCTCACCTCCCCCTTTCCTTCACATTCACGCTCCCAACCTCCATCTTTCATTGCAGCGGCGGCGGTGCAGGTGTGCGACGGTGGTGCGGCGCGGGGTGCGGCAGGTGGTCCGGCGCGGTGGTGTTTCGTTTTTGCAGGTTTGTTTCCGTTGCCCAGATTTCTTGGTTTGAAAAAAGGAAGAAGACAGGCCTTAACGGATGTCGGACATCCGTCGACGGATGTTGACATCCGTCTAAGGGCCAAACGGATTTCTCGTGGGGAGAGTTCTCGAGGACAGAGTTCTCGAGAAGAGAGTTTTCGAAGAGACAGTTCTCGTGGACGGAGAGGGTGGGCAACTCCTATTCAGGATGACCCTATCGCTGAGGATCGAGCATTTGAGGAGGAGGCATATCAGGCCTACGAGGGTCCTGTTCAGGAGACCTCTGATGACGATTACGAGGAGGAGGAACATGATGTTCCTGACATGCACGAGGAGGATGTCGGTGGATTTCCTGGAGGTCCACGTGATGCTTCTTTGCTGACGCACTATGTTCAACATGTTGCTTACGGTATTTCACAGGGCCGGGATCGAGGGGATATGCTCAAGTTGATCTCGCATGGTATAAAAGTTAATAAATTAGGACCGTGCGCTGAGGAAATTCAACACATTGTGTTGAATTCCTCTTTGATGCCTCTCACACAGATCTGCTACGATTACGTTGATAAGGGCTTATTGCTCGGATTCATAGAGAGGTGGCACTTTGAGACGAGTAGTTTCCATCTCCCTGTAGGGGAGATGACGATCACGCTTGACGATGTATCCACTTTACTTCATCTCCCGGTGCTTGGACAATTATGTGATTTGGAGGAGTTGGAGTTTGAGGAGGCTCGTACAGCCCTCGTAGACCTCCTCGGCGTTGATGGTGGCACAGCTGGTGCTGAGATGGAGGATGCACGTGGTACTAAAGTCAGACTCAGCTGGCTGAGAGACATATATGTTCAGAGGTGTCGGTCGCAGCATTGGGACTATGCTGCCAGAGCATATCTGTTGCATCTAGTAGGATGCACCATTTTTGCAAATAAAAGTGCTAGTTCTATACGCGTATATGCTTGGGGCGTTGCTGCACTCGCCCATTTGTACGAGCAGCTTGGGGATGCCAGTCTGGCTTCCACGAAGCAGATGGCTGGATATTTGACTCTTTTTCAGAGTTGGATATATGAGCATTTCCCTAGAATGGGAAGGAGGCGATTGGTGTCTTCTTATGATGACACCACACCACGTGCGACTAGGTGGCAGAGCCCTCGGCAGAGTTCGACTCTTGCAGAGATTCGGGAGCAGTTGGATGGCCTAACATACAGTGGAGTTGTATGGCATCCATACGAGGGACATCGGGGCATTCGTCCATTATTCGGAGTCTGTATGTATTCTGGATGGATTCGGATTGGGGACACCCTTTCTCGTCATTTGCCTGAGCGTCTGATGAGACAGTTTGGGTTTTACCAGGAGATTCCACGTCCACCGACTGTTGTTGCAGATGCAGATGTAGTCGCTGTTGATTTTGCGTGGTTGCACTTCACAGATCACGTTATTAGGAATGTGAGACAGGCATCATACCCTTCTGAATGTGTCGATGGATACATACAGTGGTTTAGGAGGGTTTCACATCCCTATATTATTGCTGCTCCAGCTGACGCGAGACCGCCTCTTGCGCCTACACAGCGTCCTGATGTTCCACAGGAGGCACGACCTCATCATAGACCCTCTTCACCTTCACCATCTGGCGCCTTGGCTAGATTTAAGCGAATGGCGAAAAAGATACAGTCGTTGATATCGTGTCGTCATGTGACTGAGGGTACTGTTGCACATCAGGATGCTAATGATGGCATTGACGAATATTCCCCAACTAGGAGAGGACAAAGGCATGTGCGTAGTAGACGCTCGACGTCTAATTGA 2028 0.5074 MPAPPQFGQQQPHLPSLGKFRAPPPLRKFQSSLTSPFPSHSRSQPPSFIAAAAVQVCDGGAARGAAGGPARWCFVFAGLFPLPRFLGLKKGRRQALTDVGHPSTDVDIRLRAKRISRGESSRGQSSREESFRRDSSRGRRGWATPIQDDPIAEDRAFEEEAYQAYEGPVQETSDDDYEEEEHDVPDMHEEDVGGFPGGPRDASLLTHYVQHVAYGISQGRDRGDMLKLISHGIKVNKLGPCAEEIQHIVLNSSLMPLTQICYDYVDKGLLLGFIERWHFETSSFHLPVGEMTITLDDVSTLLHLPVLGQLCDLEELEFEEARTALVDLLGVDGGTAGAEMEDARGTKVRLSWLRDIYVQRCRSQHWDYAARAYLLHLVGCTIFANKSASSIRVYAWGVAALAHLYEQLGDASLASTKQMAGYLTLFQSWIYEHFPRMGRRRLVSSYDDTTPRATRWQSPRQSSTLAEIREQLDGLTYSGVVWHPYEGHRGIRPLFGVCMYSGWIRIGDTLSRHLPERLMRQFGFYQEIPRPPTVVADADVVAVDFAWLHFTDHVIRNVRQASYPSECVDGYIQWFRRVSHPYIIAAPADARPPLAPTQRPDVPQEARPHHRPSSPSPSGALARFKRMAKKIQSLISCRHVTEGTVAHQDANDGIDEYSPTRRGQRHVRSRRSTSN 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00707 675 MobiDBLite consensus disorder prediction 109 151 - -
Vimu10g00707 675 MobiDBLite consensus disorder prediction 650 675 - -
Vimu10g00707 675 MobiDBLite consensus disorder prediction 28 45 - -
Vimu10g00707 675 MobiDBLite consensus disorder prediction 109 139 - -
Vimu10g00707 675 MobiDBLite consensus disorder prediction 165 188 - -
Vimu10g00707 675 MobiDBLite consensus disorder prediction 1 45 - -
Vimu10g00707 675 MobiDBLite consensus disorder prediction 589 620 - -
Vimu10g00707 675 Pfam Plant mobile domain 265 576 IPR019557 -
Vimu10g00707 675 PANTHER PROTEIN MAIN-LIKE 2 262 584 IPR044824 GO:0010073|GO:0048507
Vimu10g00707 675 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00707 Vimu-Chr10 6129708 6132489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00707 - - vra:106764850 915.99