Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00679 ATGGACTGGTTCTCGTGGTTGTCCAGGACCAGCCTAGAACCCTCCCTCATCTACGACTATGGCCTTGCCTTCGCCCGTAATGAGCTTCAGTTGGAAGATGCCACCTACTTCAACCACGAATTTCTTCAGAGCATGGGCATTTCCATCGCAAAACACAGGCTCGAAATCCTCAAGCTTGCCAAAAAAGAAGACGGGGCACTCAAAAGCAACAAGCTTTCTGGGGTCATCAAGAAGTGTCTGAAGAAGTGCTTCAGCCTGGTTTCGCGTGATGATCATCAAGAAGCGATGATGACGATGATGATGAAGGAGATGCCACCTGAGCCAAACTGGTACCAAGGGAAGTGGAGAAGGGCCAGGCACAAGAATGGGAGTGAGGAACTCAAGGGAGAGAATAAGGGAGTGGTGCAGAGAAGCAGGAACATTGCACTGTCAGGGCCTTTGGATGGAACAACTGGAAGAGTATTGCATGAGAAGATGGTGAACAACTGCAAGTTTATGAAGTTGTCTGGTCCTCTTGACGGGAAGGTCAATGGGTGTGAGAGATTGGTGTTTGCAAATGCAAATAGAAGTCCTATAATGAGTTCTGCTCCTTCTAGGCCTCTTGATGGAAGGTTCATCGGCACAGCAAAAAGTCCAAGGTTTTCTGGGCCACTTGATGCAAGAGCAGTGGTCTGTAATAGAAGTCCGAGGTTACCTAGACCTTTAGATGAGAGGGCCGAGAGCCCAATGGGCTACAGTCCCTACAGTAAGGTCAGAGCTGATGCAGCAGCAGATTATGATGATGATTATGCAATTTGGCCTACATTGTTTGAGGATCTTAAACCGACTTAA 831 0.4801 MDWFSWLSRTSLEPSLIYDYGLAFARNELQLEDATYFNHEFLQSMGISIAKHRLEILKLAKKEDGALKSNKLSGVIKKCLKKCFSLVSRDDHQEAMMTMMMKEMPPEPNWYQGKWRRARHKNGSEELKGENKGVVQRSRNIALSGPLDGTTGRVLHEKMVNNCKFMKLSGPLDGKVNGCERLVFANANRSPIMSSAPSRPLDGRFIGTAKSPRFSGPLDARAVVCNRSPRLPRPLDERAESPMGYSPYSKVRADAAADYDDDYAIWPTLFEDLKPT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00679 276 PANTHER OSJNBA0033G05.11 PROTEIN 1 276 - -
Vimu10g00679 276 CDD SAM_superfamily 2 62 - -
Vimu10g00679 276 Gene3D - 1 68 IPR013761 -
Vimu10g00679 276 SUPERFAMILY SAM/Pointed domain 5 61 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00679 Vimu-Chr10 5821969 5822799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00679 - - gmx:100805121 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00679 10 5821969 5822799 Vimu10g00679 10 5821969 5822799 ECH
Vimu7g01120 7 10922666 10929027 Vimu10g00679 10 5821969 5822799 PCT