Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00670 ATGGATCTTGATGGGGGGAGTTCGTCAACAGTTAGCACAGGAGTGCAGGAAATTTCAGGACGTTCAACACAACGTGGTGCATTCTATCAGTTTACACAGCAGAACCTTCCAGCATGTAAACCTGTGCTTACACCTGCAGCAATCATCGCTACATTTCTATTGATGGGTTTAATTTTCATTCCTATTGGACTTGTTACACTTCGTGCCTCAAATAGTGTTGTTGAAATTGTTGATAGGTATGACATGGATTGTATACCTGAAGAATATAGAAATAACAAGGTCGCATATATTAAAGATGACTTAATATCCAAAAACTGTTCACGATTCTTAAAGGATCTTCCACCTTCAAGAGAAAAGATTATATGTGCTGATGTAGATATTATGAATCGTGGAAATCATATCTGGTATGTCAAAAGTAGAAGTGACCTGCAGCTCTTACATGGACTTGGATACAATGACACCAGTTCTTGTAAACCTTTAGAGTCCTCCCATAATCTTCCAGTTGTACCTTGTGGGTTGATAGCGTGGAGTTTGTTCAATGATACATATAAATTCAGTCGTGGACCATCAGAGTTGAAGGTCAATCGGAAGAATATTGCTTGGAAGAGTGATCGTGATCATAAATTTGGAAAACATGTTTACCCATTTAATTTTCAAAATGGGACTTTGATTGGGGGTGGAAAGCTGGATCCAAGTATTCCTCTTGGTGATCAAGAAGATCTCATTGTTTGGATGAGGACTGCTGCTCTCCCCAGCTTCAGAAAGTTATATGGTAGAATTGAAGAGGATTTGGATGTAGATGATGTTATAGTAGTCCACCTGAAAAATAACTATAACACTTACAGTTTTGGTGGAAAGAAGAAGCTTGTTCTGTCAACATCAAGCTGGTTGGGTGGAAAAAATGACTTCCTTGGAGTTGCAAATTTATTTGTTGGCGCCTTCTGTATATTCATCTCCATCATCTTCCTGTTGCTTCATATGAAAAATCCTAGGACAGACCTTATGGGGACATGGCCTACTTATCTTGGAATAGGAAAAACATTGCCAGTTGATAAAGGGCATGGTATGGTACACTGGTGGTTGTACTTTTCTTAA 1095 0.3881 MDLDGGSSSTVSTGVQEISGRSTQRGAFYQFTQQNLPACKPVLTPAAIIATFLLMGLIFIPIGLVTLRASNSVVEIVDRYDMDCIPEEYRNNKVAYIKDDLISKNCSRFLKDLPPSREKIICADVDIMNRGNHIWYVKSRSDLQLLHGLGYNDTSSCKPLESSHNLPVVPCGLIAWSLFNDTYKFSRGPSELKVNRKNIAWKSDRDHKFGKHVYPFNFQNGTLIGGGKLDPSIPLGDQEDLIVWMRTAALPSFRKLYGRIEEDLDVDDVIVVHLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVANLFVGAFCIFISIIFLLLHMKNPRTDLMGTWPTYLGIGKTLPVDKGHGMVHWWLYFS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00670 364 PIRSF Lem3/Cdc50 5 336 IPR005045 GO:0016020
Vimu10g00670 364 PANTHER CELL CYCLE CONTROL PROTEIN 50 28 332 IPR005045 GO:0016020
Vimu10g00670 364 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 67 331 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00670 Vimu-Chr10 5737159 5745602 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00670 K26935 - gmx:100789806 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00670 10 5737159 5745602 Vimu10g00670 10 5737159 5745602 ECH