Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00666 GCAACCCACACTTTGTTTCTTCTAGTCAATATTCCGGTCAAACAACCTCGCCGGAAAATGGACGAGTCGTGGAGAATGCGAATGGGTCTCACGCCGGGGCTCCCTCGCCGCCGATCCATGGAAGACCGCTCCGCCTCCCGCACGCGCCGCTCCATCTTCTTCGCCGCCACCGCCGAGGCGGAAACCCTCGACCCGGACGACTTTGCCGATGTCTTCGGAGGCCCGCCGAGGAGCCTCCTCGCGCACAAGTTCTCCAGGTCCAATTCCTTCTACGAGGAGATTTTCCAACCGCCGGAGTTCGCGTCTCCGGCAAAGTCGAAGGGCGGCCGGAGCCTTCCGGTGTTCCGGATTCCAGCCAAGAACGAGGCGTTTTACAGCGACATATTCGGGTCGGACGATGACCGGCGGTCGCGGGAGCGGTCTGGGCCGCAGTCGAAGGCTAAATCGAAGTCGAATTCTTCGTCGGCGCTGAGTTCCGAGGAGCTGAGCCCTCTCCGGCCGGCTATCGGTGACGACGTGGCATTATCTGCCTTTGCTTCTAAACTCAGGCCAATAAATGTGCCATGCAGATGGAACTCAACCACTATGAAGCCTGAGGAACACCCAATTAAACAAGGGGGATCACTTTTTCCATTCAATAATCACTCATATGAAGTTCATTGTCAGGATAATGAGTACAAGGAGACCTTCAAGAGTCCTCATTTCGGATTCTCACGAAGAGTCTCCTCGCCAGAGACAATTAGTCTCGAATCCAATTCATACCAAAGCATGAAGGTATCCGCTGATGACTGGGAACTCAGTTCCCCGTTTTCTGCTGTCTCTGGCCTTTGTCAAGAACCTGAGGCAAAATCCTCGGTTCATGATTATATTCTTCCAGAACTCGTCATAGAACAGGACGATGACGAAGTTATGAGCTCCTATGTTATAGAGGTCAACTCCAACCTCAGAGAGGAAAGTTGTGGAACAGCAGACATTGATGAAGCAATAGCATGGGCCAAGGAGAAGTTTCAATCACGAAATTCTGATGAAGAATCAAGCTTCAGAAATGAAAGCAGTGAACAAACTACAGCCGTGGAAGGAAGGTCTGATGCAGGTGAATGCCATAGTGATGAAACGGGAAACGTTAAATCTTCCAAGGGACAGACAGAAACAGAGAAGCTGGACAGAGATATAAGATTGTGGTCATCTGGCAAGGAAACTGACATTCGGCTACTCCTTTCAACACTACATCATATTTTATGGCCTGAGAGTGGCTGGTATGCTGTTCCTCTTCCGAACCTAATAGAAAGTTCACAAGTGAAGAAGGCCTATCAGAAAGCAAGATTATGCCTCCACCCTGACAAACTGCAGCAAAGAGGAGCAACACTCCTACAAAAGATGCGTGGACTGCATTCATTTCTGAAGACGTTTCCTTCTAAACAGCAGGTGACTCCAATTCCTGATAACTCAGTTTTGGTTTAA 1461 0.501 ATHTLFLLVNIPVKQPRRKMDESWRMRMGLTPGLPRRRSMEDRSASRTRRSIFFAATAEAETLDPDDFADVFGGPPRSLLAHKFSRSNSFYEEIFQPPEFASPAKSKGGRSLPVFRIPAKNEAFYSDIFGSDDDRRSRERSGPQSKAKSKSNSSSALSSEELSPLRPAIGDDVALSAFASKLRPINVPCRWNSTTMKPEEHPIKQGGSLFPFNNHSYEVHCQDNEYKETFKSPHFGFSRRVSSPETISLESNSYQSMKVSADDWELSSPFSAVSGLCQEPEAKSSVHDYILPELVIEQDDDEVMSSYVIEVNSNLREESCGTADIDEAIAWAKEKFQSRNSDEESSFRNESSEQTTAVEGRSDAGECHSDETGNVKSSKGQTETEKLDRDIRLWSSGKETDIRLLLSTLHHILWPESGWYAVPLPNLIESSQVKKAYQKARLCLHPDKLQQRGATLLQKMRGLHSFLKTFPSKQQVTPIPDNSVLV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00666 486 MobiDBLite consensus disorder prediction 128 163 - -
Vimu10g00666 486 MobiDBLite consensus disorder prediction 340 383 - -
Vimu10g00666 486 MobiDBLite consensus disorder prediction 146 161 - -
Vimu10g00666 486 Gene3D DnaJ domain 377 468 IPR036869 -
Vimu10g00666 486 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 20 367 - -
Vimu10g00666 486 MobiDBLite consensus disorder prediction 128 145 - -
Vimu10g00666 486 SUPERFAMILY Chaperone J-domain 377 453 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00666 Vimu-Chr10 5690614 5693253 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00666 - - gmx:100801416 754.977