Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00658 ATGTATAGGTCTAGATTAAGAGAGGAAGAAAACCAAGAAACCTCATATGAATTTGGTACCAAGTTGGATGCAGTTCCTGTAGTCAACCCTACAACTCCAGGCACAGGAAATCCATATCCTACACTAAACCCAACAACTCCTCAAGCACCTGGCACAATAGGACAAACCCCATTAACTCCTACAACCCCATACATGACTCCCATAAACCCATACACAAACCCCACAACCCCAAAAACAAGTCCTACAAATCCAACTATGGTCCCACCTAGCCCTACTACAACCACTACTCCCACAACCCCAACCACTCCTGCTACTGCATCAGCAGGTGGTCAGTGGTGTGTTGCCAGCCAATCAGCTGCAGAGAGCACTCTGAAGGTAGCTCTTGACTATGCTTGTGGCTATGGTGCAGACTGTTCAGCAATTCAACCTGGAGCAGGTTGCTACAATCCAAATACTCTGAAAGACCATGCTTCTTATGCATTTAATGACTACTACCAGAAGAATCCAGCTTCTACAAGCTGTGCATTCGGAGGAACTGCTGTACTTACAAACAAGGATCCCAGTAAGACTTTTCATCAAGCATTAAAGCTTCACTAG 597 0.4539 MYRSRLREEENQETSYEFGTKLDAVPVVNPTTPGTGNPYPTLNPTTPQAPGTIGQTPLTPTTPYMTPINPYTNPTTPKTSPTNPTMVPPSPTTTTTPTTPTTPATASAGGQWCVASQSAAESTLKVALDYACGYGADCSAIQPGAGCYNPNTLKDHASYAFNDYYQKNPASTSCAFGGTAVLTNKDPSKTFHQALKLH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00658 198 Gene3D - 107 197 - -
Vimu10g00658 198 MobiDBLite consensus disorder prediction 1 21 - -
Vimu10g00658 198 SMART X8_cls 111 194 IPR012946 -
Vimu10g00658 198 MobiDBLite consensus disorder prediction 81 96 - -
Vimu10g00658 198 Pfam X8 domain 111 180 IPR012946 -
Vimu10g00658 198 MobiDBLite consensus disorder prediction 1 16 - -
Vimu10g00658 198 MobiDBLite consensus disorder prediction 72 104 - -
Vimu10g00658 198 PANTHER BETA-1,3 GLUCANASE 108 190 IPR044788 -
Vimu10g00658 198 FunFam Glucan endo-1,3-beta-glucosidase 4 106 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00658 Vimu-Chr10 5610021 5610787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00658 56 195 Glycoside Hydrolase AT5G55180 40.127 4.78e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00658 - - gmx:102659696 223.402