Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00640 ATGGAGGAAAAACCTTCGGCGTCGTCTTCTATTTCAGCATCTGCGTCGGCATCATCAACATCAGAATCGTCATCGTCGGTGCCATGGACACTCAGAGACCAGTTACCGATAAAACTGGAAGGATTGAGCAATTTAGTTGCATGGAAAGAACAAGTTGAGCGTGTGTTGATCTCAGAAAATTTAACAAGGTTCGTTACAAACCCTGTGCCCCCTATTAAATATGCAAGCGAAGTCTGTCGTACTGTTAATCTCATAACGGAGGAGTATCGGCACTGGGTTGTTCAAGATCAAACGGTGCGCATGTGGTTGTTATCATCGTTATCTGAATTCATGTGTTCTTTTGTGATGGGATGGGAACACGCGTGGGAGGTTTGGAGTGGAGTGCACGAACTCTGTCGTAGTGAGTTGGTAAGCAAGATCAAGATTGCCCTTAGGAAAGAGATGAAGAATACAAAAAAAGGAAATCAAACTGTCAAAGATTACGTTAACAGCATCACTTATTTCATTGATACGTTGATTGTTTTGGGAGATGATGTGACTGAACGAGAACATATTGACGCCATCTTGGATGGGTTGCCGGAAAAGTATGAATCTTTGCGAACGATCATTCATGCACGTGAAGATGCCACGGTTTCTGATCTTGAATCGTTGATGACAATTCAAGAAACGGTACTTAACACTTTAGCGATTGAACTTCCCCTCGATGCTCTACTTCCCGATGGATCTCTTCATCTTGTTACTGAAGGACATCTTGACAGCGACAATGTTGATGCAGAGGGAAGAGGCAGCGGCGGTGGTCAAGGTGGTGGCAGAGGTCGCCGGCGCAGTGGTCGTCGCCGTGTAGGCGGTCAAGGCAGTGGTGGCCATAGAGGTAGCAATTAG 882 0.4569 MEEKPSASSSISASASASSTSESSSSVPWTLRDQLPIKLEGLSNLVAWKEQVERVLISENLTRFVTNPVPPIKYASEVCRTVNLITEEYRHWVVQDQTVRMWLLSSLSEFMCSFVMGWEHAWEVWSGVHELCRSELVSKIKIALRKEMKNTKKGNQTVKDYVNSITYFIDTLIVLGDDVTEREHIDAILDGLPEKYESLRTIIHAREDATVSDLESLMTIQETVLNTLAIELPLDALLPDGSLHLVTEGHLDSDNVDAEGRGSGGGQGGGRGRRRSGRRRVGGQGSGGHRGSN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00640 293 MobiDBLite consensus disorder prediction 253 293 - -
Vimu10g00640 293 PANTHER - 37 292 - -
Vimu10g00640 293 Pfam gag-polypeptide of LTR copia-type 92 215 - -
Vimu10g00640 293 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00640 Vimu-Chr10 5508604 5509485 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00640 - - pvu:PHAVU_009G215200g 293.508