Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00639 ATGCCGGTAGAACTGGAAGGAGTGAGCAATATATTTCCATGGAGAGAACAAATCAAGGATGAGTTGATCTCAGAAAATTTAATGAGCTTCGTTACAAACTGCGAGCACCCAAAAAAATATGCAAACGATCTCTGTCGTTCTGCTAATATCAGAACGGAGGAGTATCGGAAATGGCGTTCTAAAGATCAAATGGTGCGCGTGTGGCTGTTAACATCTTTATCTGATTTCATGCGTTCTTTTGTGGTTGGATGGGAACACGCGTGGCAGATCTGGAGTGCAGTGCACGAAATCTGTCGTACTGAGTTGGTAAGCAAGATCAAGATTGCCCTTAGGAAAGAGATGAAGGAGACAAAGAAAGGAAATCAGAATGTCATAGATTACCTTAGCAGCATCGGTTATTTCGTTGATATGTTGGTTGAAATGGGAGATGAGGTGACTGAACGAGAACATATTGACGCCATCTTGGAAGGGTTGCCGGAGGACGGCTATGATTCTGTGCGAATGATCATTCGTTCACGTGTAGATGCCACGTCTTCTGATCTTGAAACGTTGATGATAATTCAAGAAATGGTAGTCAGTGGGACTGAACTTCCCCTTGATGATCTTCATCGTAGCAACGACAATGTTGATGCAGCGGGAAGAGGCAGCGGCGGTGGTGAACACGGTGGCAGAGGGGATGGTCAACGTGGTGGCAGAGGTCGCCGGCGCAGTGGTCGTCTCCGTCTACGGGGTGAAGGCAGTGGTGGCCGTACAGGTAGCGGCTAG 765 0.4732 MPVELEGVSNIFPWREQIKDELISENLMSFVTNCEHPKKYANDLCRSANIRTEEYRKWRSKDQMVRVWLLTSLSDFMRSFVVGWEHAWQIWSAVHEICRTELVSKIKIALRKEMKETKKGNQNVIDYLSSIGYFVDMLVEMGDEVTEREHIDAILEGLPEDGYDSVRMIIRSRVDATSSDLETLMIIQEMVVSGTELPLDDLHRSNDNVDAAGRGSGGGEHGGRGDGQRGGRGRRRSGRLRLRGEGSGGRTGSG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00639 254 MobiDBLite consensus disorder prediction 198 254 - -
Vimu10g00639 254 PANTHER - 7 237 - -
Vimu10g00639 254 Pfam gag-polypeptide of LTR copia-type 58 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00639 Vimu-Chr10 5500946 5501710 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00639 - K03692 pvu:PHAVU_009G215300g 221.861