Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00635 AAAAACTGCCCTCGACTTAGTACCTTCCAGAACGCTTCCATTTGCCCCTTGAAATTCTCGCCACTGGGATCCGTCGAAGAACGCCAAAAATCTCGGTGCTTTGTTTCGGAAGCACCGGCATTGGGAACTGTGATGGTGAAAACGGAGCCTAAGAAGAAGGGTTGGGGAGTGCCATGGCTTTGGGTTCTGATGGCTATCGTGGCTGTGTTTGTTGCTATGGCTGTGTCGTCCAAAACTTCTCCCAGAATTTCTCTGTCTGGAGCCATTGATAGAGCTTGTCAGTGTGCCCGGGGTGCACCGAAGTTCAGTGGCATGGTAGAGGACTGTTGTTGTGATTACGAAACTGTGGACCATCTCAATGAGGAAGTGTTGAACCCTTCCCTCCAAGAACTCGTGAAGACCCCTTTCTTTCGATATTTTAAGGTGAAATTATGGTGTGACTGTCCTTTCTGGCCCGATGACGGCATGTGCCGGTTGCGGGACTGTAGTGTATGTGAATGTCCAGAAGGTGAATTCCCTGAATCATTTAAGAAGCCACATGCCTTCTCAATGAATGATCTTGTTTGTCAAGAAGGTAAACCTCAGGCAGCTGTTGACCGTACTTTAGACAGTAAAGTTTTCAGAGGATGGACAGAAATAGACAATCCATGGACAAATGATGATGAGACTGACAACGACGAGATGACATACGTGAATCTTCAACTGAATCCTGAAAGGTATACTGGTTACTCTGGTGCTTCTGCAAGAAGGATATGGGATGCTGTCTACTCTGAGAACTGCCCCAAATATCCGTCTCAAGAGTTATGCCAAGAGGAAAAGATTTTGTATAAATTGATATCCGGTCTTCACTCCTCCATATCAGTACATATAGCTGCTGATTATCTACTTGATGAGGCTTCAAATTTGTGGGGCCAAAATCTTACTTTGGTGTATGATCGAGTCCTAAAATACCCTGATCGTGTCAGCAATTTGTATTTCACTTTTCTCTTTGTGCTGCGAGCAGTGACCAAGGCTGCAGATTATCTGGAACAGGCAGAGTATGATACAGGTAACCATAATGAGGACCTTAAGACACAGTCCTTGATAAAACAGCTACTTCATGACCCCAAGCTTCAAGCTGCTTGTCCGATTCCATTTGATGAAGCTAATTTGTGGAGAGGCCAAAGTGGACCTGAGCTAAAACTGAAAATTCAACAACAATTTAGGAACATCAGTGCATTGATGGATTGTATAGGATGTGAGAAGTGTAGATTATGGGGTAAACTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCTCTGTTGATGGTCAAGAAAACTCAAGTCAAACACTGCAGCTGCAAAGGAATGAGGTAATTGCATTGATGAACCTTCTCAATCGGCTTTCAGAATCTGTCAAATTTGTCCATGAAGTGGGACCTGTAGCTGATAGTGTGATGGAAGGACATGTTTCTGCTCATCAAACATTGATTAGCGGGTGGAAAAAAATTTGGTCCTTTGTATCTAAAACTTAG 1521 0.4372 KNCPRLSTFQNASICPLKFSPLGSVEERQKSRCFVSEAPALGTVMVKTEPKKKGWGVPWLWVLMAIVAVFVAMAVSSKTSPRISLSGAIDRACQCARGAPKFSGMVEDCCCDYETVDHLNEEVLNPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEGEFPESFKKPHAFSMNDLVCQEGKPQAAVDRTLDSKVFRGWTEIDNPWTNDDETDNDEMTYVNLQLNPERYTGYSGASARRIWDAVYSENCPKYPSQELCQEEKILYKLISGLHSSISVHIAADYLLDEASNLWGQNLTLVYDRVLKYPDRVSNLYFTFLFVLRAVTKAADYLEQAEYDTGNHNEDLKTQSLIKQLLHDPKLQAACPIPFDEANLWRGQSGPELKLKIQQQFRNISALMDCIGCEKCRLWGKLQVLGLGTALKILFSVDGQENSSQTLQLQRNEVIALMNLLNRLSESVKFVHEVGPVADSVMEGHVSAHQTLISGWKKIWSFVSKT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00635 506 PIRSF ERO 57 506 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Vimu10g00635 506 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 124 470 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Vimu10g00635 506 SUPERFAMILY ERO1-like 111 479 IPR037192 -
Vimu10g00635 506 PANTHER ERO1-RELATED 67 480 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00635 Vimu-Chr10 5479281 5483198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00635 K10950 - gmx:100798225 818.535