Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00634 ATGCAAGTCATGAAATCTCTCTCTCAAGTCGACCCAACACCGCTGCAACAACCACAACCACCCTCTTCCTCTCTCTCGCTAGGGCTCAACGTCATGAGACCCTATGAGATGGTGCACCACTTGGTCTCATGCAACGCCGTCGTCGTCTTCAGCGTCACCGACTGCTGCATGTCCACCGTCGCCAAGCGCCTCCTCTTCAGCCTCGGCGTCGGCCCCATTGTCGTCGAGCTTGATGAACAGGCCAACGGTGCCGGAATCCGGTCGGTCCTCAACCAGCTTGCCGGGGCCCAGCAGCCTGTTCCTGCTGTCTTCATTGGTGGGAAGTTTCTGGGTGGGGTGCAAACCCTGATGGCCAGCCACATAAATGGAACCCTGGTTCCACTCCTCAAAGAAGCTGGGGCTTTATGGCTTTGA 414 0.5749 MQVMKSLSQVDPTPLQQPQPPSSSLSLGLNVMRPYEMVHHLVSCNAVVVFSVTDCCMSTVAKRLLFSLGVGPIVVELDEQANGAGIRSVLNQLAGAQQPVPAVFIGGKFLGGVQTLMASHINGTLVPLLKEAGALWL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00634 137 Pfam Glutaredoxin 47 109 IPR002109 -
Vimu10g00634 137 SUPERFAMILY Thioredoxin-like 35 136 IPR036249 -
Vimu10g00634 137 CDD GRX_GRXh_1_2_like 46 128 - -
Vimu10g00634 137 MobiDBLite consensus disorder prediction 1 23 - -
Vimu10g00634 137 ProSiteProfiles Glutaredoxin domain profile. 35 136 - -
Vimu10g00634 137 NCBIfam glutaredoxin-like family 38 137 IPR011905 -
Vimu10g00634 137 Gene3D Glutaredoxin 33 136 - -
Vimu10g00634 137 PANTHER GLUTAREDOXIN 36 137 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00634 Vimu-Chr10 5458955 5459368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00634 36 137 Miscellaneous Gene Families AT4G15700 48.039 8.13e-28 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00634 K03676 - gmx:100775537 211.846