Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00626 ATGGAGGGTAGGGAAGAGGAGGCAAAAGCAATTCTGAAAAAGATTTACTCGCCTAGCGAAGTTGAAGGTGAAATTCAGGCTTTGAAGGAATCAGTTGATATGGAAATTAAGGAATCATCAGAGAAGATCGGCTTGATCAAACTGTTGAGAACCCCAGCTGTGAGAAGAGGTTTATATGCAGGCATGGGTCTTCTAATCTTCCAGCAGTTTGTGGGGATCAACACTGTGATGTACTACAGCCCCACCATTGTTCAGTTAGCTGGTTTTGCATCTAACAGAACAGCACTGCTTCTGTCACTCATCACAGCTGGTTTGAATGCATTTGGTTCAATTGTGAGTATATACTTTATTGACAAGACTGGTAGGAAAAAACTTGCTCTGATCAGTTTGTGTGGAGTTGTGTTCTCCCTGGCTATGCTAACTGTCTCTTTTCGAGAAAGTGAAATGCATGCTCCAATGGTGAGTGCCATTGGAACCTCTCAGTTGAACAACACATGTCCTGATTACAAAGCAGCTGTGAACCCTAATGAATGGAGTTGCATGACATGCCTAAAGGCTTCATCATCTTGTGGTTTTTGTGCTGCTGATGACAAGGTACAAATCCATTCCACCCTTTTTCATTTTGCCAACACCATGTTTCAATTTTTCAGTTCACAACACTCTTACCAATTACTGGGAGGGAAGGGCTAG 690 0.4261 MEGREEEAKAILKKIYSPSEVEGEIQALKESVDMEIKESSEKIGLIKLLRTPAVRRGLYAGMGLLIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITAGLNAFGSIVSIYFIDKTGRKKLALISLCGVVFSLAMLTVSFRESEMHAPMVSAIGTSQLNNTCPDYKAAVNPNEWSCMTCLKASSSCGFCAADDKVQIHSTLFHFANTMFQFFSSQHSYQLLGGKG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00626 229 Gene3D MFS general substrate transporter like domains 1 166 IPR036259 -
Vimu10g00626 229 Pfam Sugar (and other) transporter 2 144 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu10g00626 229 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 2 168 - -
Vimu10g00626 229 SUPERFAMILY MFS general substrate transporter 35 143 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00626 Vimu-Chr10 5358603 5360764 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00626 2 195 Organic Solute Cotransporters AT1G30220 69.192 1.06e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00626 K08150 - gmx:100796800 333.183