Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00621 ATGGCTAATTCAACCATCAAAATTCTTGGCATAGTTATATTATTCCTTTCTCTTATTTCTCAAGGTTTTGGTGAATGCTATCTATGGGATGTGATTACAAGCCAAAAGAGAACAGGAGTTCAAGTTGAAGGAAAACCAGAGTGGATTGTGACTATCACTAATAACTGTCCATGCACAGTGAAAAATGTGCTTGTGAATTGCAGGGAATTTCAATCCATTGAACCCATAGACTCTTCAATCTTAGCAATTCAAGGCAATTTGTGCCTTGTTAAAGCTGGTCAACCTATTTATAATAAGGAAATTATCCAATTTAAATATTCTAGGGATACCATATTTCTATTTTATACTAAGTTTTTTCAATTATTGTGTTCTTAA 375 0.328 MANSTIKILGIVILFLSLISQGFGECYLWDVITSQKRTGVQVEGKPEWIVTITNNCPCTVKNVLVNCREFQSIEPIDSSILAIQGNLCLVKAGQPIYNKEIIQFKYSRDTIFLFYTKFFQLLCS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00621 124 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 17 115 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00621 Vimu-Chr10 5326809 5327441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00621 1 112 Glycosyltransferase AT4G32110 43.363 1.30e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00621 - - pvu:PHAVU_009G216700g 176.792