Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00615 ATGGGTTGTGTTTGGTCAAGTATTGATGAGGATGAGAAGGTTGGTAGGTGCAAGGAAAGGAAGAGGTTAATGAAACAGTTGGTGAAAATTAGAGGGGATTATTCTGATTCCTTATTGGCTTATTTGAAATCACTGAGAAACACTGGTGCCACCCTGAGGCAATTCACTGAGTCTGATACAATTGAATTTGAAACTGCCTCTAATGGCATAGCTGAGCCAGCTTCTTCATCTCCCAAAGCAGACAAGCTGCTACCACCGCCACTGCCTCCTTTTCTCACTGATAAGAGTATGGTGCACGAAGATGAGATACTAGAGACAGATGACACCGATGTTCCTCCACTGCAAATTGATCCAAGTTTGAGTTCATTACGGCTGTATCGATGCCCTGATAGAAACGAAATGATGGAACCAGTGGAGGAGGATAATTGGGAAGAAACCAAAACAGAATTTGAGGATGAAGATGCAGAAGCTGCTGTAATTGCTGAAAAATTGCGTAGGGGAAAGCAGCAGTTGATAGAAACAGTTGATGAAAATTCCTCTGCAATAAGTTTGTATAGAAAAGATGCTACAGCTATGCCTGTTACAGTTTCTAGAAGGGGGAAAACGTTGGAGGGTATAGGTAAGGAGTTGGATGACCAATTCTTGAAAGCATCTGGATGTATAAAGGAAATTGCTGTTCTTATTGATATCAGTGGAGGAGATACTCTTCTGCGACAGAATTCTGGGCGTCATGATAGGAAGAGAGGCAATTCTGCAAAGGTCTTCAGTGTTCTGTCATGGAGTAGGCATTCAAAATCACCACCATCCACCAAAGATTGTGCTGAATTTTCTGGTCATAGTGAACCATGCAAGCCTGGAGCTCATTGTGCCACACTCAAAAGATTATACGCAGCAGAGAAGAAACTGTTCAAGGCAGTAAAGCTTTCTTCCCATTCGAACGTGATCTACCTCATTGTTTTTATCGTGGTTGCTGCCCTGCTGGTTTTGTCATCTTTTGTGGCTCTCCAGGACAATGCTGAAGAGGGTATTGTTGCCTTGGAGTTCGATAGAAAGATGTCATTATTGCAAAAGCAAGAAGACGAGAACCTTGACATGGTGAAAATTGACAAAACTCGATCATGTGTTGAGAAGTTGGAATCTGATTTAATAAGCTTACGGCAGTGCATCAGTGATACAACTTCATCAATTTTGGAAATGATAGATGAAGAGCTTTTACCCCAGCTGGTTGCATTAACTGCAGGGTTGGTACAAATGTGGAGAACAATGCGTGAGGCACACGAAGCCCAAATACTCATCTCCCAGCAGTTGAGTAGCCTCAGTGATAGTCACAACACGATACTAAATTCTGAATATCATCACCAGGCTACAATTCAATTCCAGACTGAGGCCTCTTATTGGTATAGCAGCTTTTGCAAACTTGTAAAATCTCAACGGGAGTATGTGAGGATCCTCCATGAATGGATTAAGCTTACCGAAAGCCTCAGGGATGGTCAAGAAAGTAGCAATCATTCTTCTGTTCTTACCATTTGTGAGCAGTGGGAGCACGGGCTTAACGACTTACCAGAAAAGGCGACATCTGATGCAATAAAAAGCCTTTTGTCATGCATCCGGTCCATAACTTCTCAACAGACAGAGGAACACAACATTCTGAAAAAGTTAGATAAACTTGAAAGGAAATTCCAAAAATGTATGAACAGCTTGGCTGAGATGCAGCAGAGAATAGATGGAGATATAGCTGATACAAGCCCCAGGCATCCAATACATGTTAAGAAAACTGAAACAGAAGAAATTAAGAAGCTTGTGGAGAATGAGAGAGCAAATTATTTGGATGCTGTTCGGTATAGTAGGGCCATGACCCTTGATCAGCTACAAACTACACTTCCCCCACTCTTCCAGTTACTGATGGAATTTTCAAGTGCTTCATCCCATGCTATTCAGCTTATCAATGCCCCCACTGAAGCCATTTGA 1968 0.4223 MGCVWSSIDEDEKVGRCKERKRLMKQLVKIRGDYSDSLLAYLKSLRNTGATLRQFTESDTIEFETASNGIAEPASSSPKADKLLPPPLPPFLTDKSMVHEDEILETDDTDVPPLQIDPSLSSLRLYRCPDRNEMMEPVEEDNWEETKTEFEDEDAEAAVIAEKLRRGKQQLIETVDENSSAISLYRKDATAMPVTVSRRGKTLEGIGKELDDQFLKASGCIKEIAVLIDISGGDTLLRQNSGRHDRKRGNSAKVFSVLSWSRHSKSPPSTKDCAEFSGHSEPCKPGAHCATLKRLYAAEKKLFKAVKLSSHSNVIYLIVFIVVAALLVLSSFVALQDNAEEGIVALEFDRKMSLLQKQEDENLDMVKIDKTRSCVEKLESDLISLRQCISDTTSSILEMIDEELLPQLVALTAGLVQMWRTMREAHEAQILISQQLSSLSDSHNTILNSEYHHQATIQFQTEASYWYSSFCKLVKSQREYVRILHEWIKLTESLRDGQESSNHSSVLTICEQWEHGLNDLPEKATSDAIKSLLSCIRSITSQQTEEHNILKKLDKLERKFQKCMNSLAEMQQRIDGDIADTSPRHPIHVKKTETEEIKKLVENERANYLDAVRYSRAMTLDQLQTTLPPLFQLLMEFSSASSHAIQLINAPTEAI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00615 655 PANTHER UNCHARACTERIZED 1 649 - -
Vimu10g00615 655 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Vimu10g00615 655 Pfam Protein of unknown function (DUF632) 206 537 IPR006867 -
Vimu10g00615 655 Coils Coil 539 573 - -
Vimu10g00615 655 MobiDBLite consensus disorder prediction 67 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00615 Vimu-Chr10 5275057 5279685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00615 1 99 Acyl Lipid Metabolism Gene Families AT2G27090 31.313 1.76e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00615 - - gmx:100809759 925.235