Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00584 ATGACGACGCGAAGCAGCCACCAGATGAAGAAGACGCTCAACTGGTGGGACCTCATCTGGCTCGGCGTCGGCTCCGTCGTCGGCGCCGGAATATTCGTCCTCACCGGATTGGAGGCTAGGAACACCGCCGGTCCCGCCGTCATCTTGTCGTACGTCGTGTCCGGTTTCTCCGCCATGCTGTCCGTTTTCTGTTACACCGAGTTTGCCGTCGAAATCCCTGTTGCCGGTGGTTCATTTGCCTACTTAAGAGTGGAGCTAGGAGACTTTGTGGCCTTCATAGCTGCAGGAAACATCCTTCTTGAGTACGTAATAAGTTGTGCCGCAGTGGCAAGGTCATGGACCCCATACTTCGCCACCCTCTGCAACAAAAACCCTGATGATTTTCGCATAGTCATGCATAACATGAACCCTAATTATGGCCACCTTGACCCTATAGCTGTCGTGATCCTTGCACTCGTATGCATCCTTGCGGTTTACAGCACCAAAGGCTCTTCAATCTTCAACTACGTTGCCTCAGTCGTACACACAGTCATCCTTGTCTTCATAGTCATAGCAGGTCTTGTCCATGCCAAGCCTCAAAACTACGTACCCTTTGCACCCTTCGGTGTTAGGGGCGTCTTCCAAGCTTCGGCTGTGCTCTACTTTGCCTATGTGGGGTTCGATGCTGTTGCAACCATGGCTGAAGAAACCAAGAACCCTTCAAGGGACATTCCAATTGGGCTTGTAGGTTCAATGGTGATAGCCACAGCGGCATATTGCTTGCTTGCAGCCACACTGTGCCTCATGCAACCGTATACCAATATTGACGTGGATGCACCCTTTTCGGTTGCGTTCAGTGCCATAGGGTGGGATTGGGCTAAGTACATTGTTTCATTGGGGGCTTTGCAGGGAATGACCACAGTGTTGTTGGTGACTACTGTGGGTCAAGCTCGGTATCTGACTCACATTTCACGTACACACATGATGCCTCCTTGGTTTGCTTTGGTGAATGAGCGCACTGGGACACCTGTGAATGCCACAATTTCCCTGGTTCTGATCTCAGCTGTGATTGGTTTCTTCACTGAACTTGAGATTCTCTCTAACCTCTTGTCAATTTCCACTCTCTTCATCTTCACGTTGGTGGCAGTTGCTCTCCTTGTGCGTAGGTACTACTCCAGTGGAGTCACAACAAAGGGGAACCAAATCAAGCTCATTGTGTTCATTGTGGTGATCATTGGCTCTTCATGTGGGATTTCATCTTATTGGGCAGTAAGTGATGGTTGGATTGGTTATGTTATTCTTTGTCCAATTTGGATTTTGGCTACAGGAGGGCTTTGGTTTGTGGTTCCACAGGCAAAGGAGCCAAAACTTTGGGGGGTGCCTTTGGTTCCATGGCTACCTTCCATATCTATTTTTGTTAACATATTCCTTCTTGGATCTATGGATAAAGATTCGTTTGTTAGGTTTGGTGTTTGGACTGTGCTTCTCTTGGTTTACTATGTCCTCTTCGGGTTGCATGCTTCTTATGACACAGCTAAGGAGTTTGAGGCGCAGCGTTGTGCCGAAAGGGAGTTGAACAGGTTGGAAGATGGAGTCGTGTCTTCTACGTAG 1590 0.4893 MTTRSSHQMKKTLNWWDLIWLGVGSVVGAGIFVLTGLEARNTAGPAVILSYVVSGFSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDFVAFIAAGNILLEYVISCAAVARSWTPYFATLCNKNPDDFRIVMHNMNPNYGHLDPIAVVILALVCILAVYSTKGSSIFNYVASVVHTVILVFIVIAGLVHAKPQNYVPFAPFGVRGVFQASAVLYFAYVGFDAVATMAEETKNPSRDIPIGLVGSMVIATAAYCLLAATLCLMQPYTNIDVDAPFSVAFSAIGWDWAKYIVSLGALQGMTTVLLVTTVGQARYLTHISRTHMMPPWFALVNERTGTPVNATISLVLISAVIGFFTELEILSNLLSISTLFIFTLVAVALLVRRYYSSGVTTKGNQIKLIVFIVVIIGSSCGISSYWAVSDGWIGYVILCPIWILATGGLWFVVPQAKEPKLWGVPLVPWLPSISIFVNIFLLGSMDKDSFVRFGVWTVLLLVYYVLFGLHASYDTAKEFEAQRCAERELNRLEDGVVSST 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00584 529 PIRSF AA_transporter 1 450 - -
Vimu10g00584 529 PIRSF AA_transporter 397 515 - -
Vimu10g00584 529 Gene3D Amino acid/polyamine transporter I 7 447 - -
Vimu10g00584 529 Pfam Amino acid permease 13 393 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vimu10g00584 529 FunFam Cationic amino acid transporter 5 7 441 - -
Vimu10g00584 529 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 5 502 - -
Vimu10g00584 529 Pfam C-terminus of AA_permease 451 501 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00584 Vimu-Chr10 4797153 4799869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00584 1 507 Organic Solute Cotransporters AT2G34960 59.332 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00584 K03294 - gmx:100785573 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00584 10 4797153 4799869 Vimu10g00584 10 4797153 4799869 ECH