Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00571 ATTGAAAGAGAGATAACATCACTTCAGACGGAGGAAAAAAAATTGGTGGCAGAAATTAAGAGAGAAGCAAAAACTGGAAACGAAGCTGCCACCAGAATCTTAGCTCGTCAACTTGTTAGGTTACGTCAACAGATAACCAATTTGCAGGGAAGTCGTGCGCAGATCAGGGGTGTTGCAACTCACACACAGGCATTATATGCAAGCACTTCAATCTCCACAGGAATGAAGGGTGCAACTAAAGCAATGGTGGCAATGAATAAGGTTCCTTTCCTTGGTACTAAATCTGAATTTAGTAAATGGCCAAAAAGTCTTGAACTTGAGTATGCCATTGCCAAGGAACAAATGGCACCCGCAAAACAGGTGAAAGTGATAAGAGAATTCCAAAAGCAATCAGCCCAATTGGACATGACGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCCGAGGAAGAAACCGAAGAGCTCACCAACCAGGTTCTTGATGAGATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGACGAATTGCTTCAAGGAATACTGAAAATGTTGCTCCAAGATCAGAAGAATCCCAAGATGTTGAAGAACTTGAAAAGAGATTGGCATCTCTTCGAAGAATATAA 651 0.4117 IEREITSLQTEEKKLVAEIKREAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKVPFLGTKSEFSKWPKSLELEYAIAKEQMAPAKQVKVIREFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVAPRSEESQDVEELEKRLASLRRI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00571 216 MobiDBLite consensus disorder prediction 180 205 - -
Vimu10g00571 216 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 214 IPR005024 GO:0007034
Vimu10g00571 216 MobiDBLite consensus disorder prediction 180 194 - -
Vimu10g00571 216 Coils Coil 196 216 - -
Vimu10g00571 216 Pfam Snf7 1 87 IPR005024 GO:0007034
Vimu10g00571 216 Pfam Snf7 112 184 IPR005024 GO:0007034
Vimu10g00571 216 Coils Coil 144 164 - -
Vimu10g00571 216 Gene3D - 1 93 - -
Vimu10g00571 216 Gene3D - 108 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00571 Vimu-Chr10 4691434 4693993 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00571 K12191 - gmx:100777179 307.375